Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0460 ATGGTGAGAACTCCAAGCTGTGACAAAAGTGGACTGAAGAAAGGAACGTGGACACCCGAGGAAGACAGGAAGCTAATTGCTTATGTTACTAGGTATGGGTGCTGGAATTGGCGCCAACTTCCCAAGTATGCAGGCCTAGCAAGGTGTGGAAAGAGTTGTAGACTTCGATGGCTAAATTACCTGAGGCCCAACATCAAAAGAGGCAATTACACTCCTGAAGAAGAACAACTCATTATCCAACTGCACCAACAACAGGGGAACAGATGGTCTGCGATTGCTGCAAAGCTGCAGGGAAGAACAGACAATGACATAAAGAACTACTGGCACACCAATCTCAAGAAGAAGATTCAAGACAAGTCGGGAAAACAACAGGCCCAGGCAGAAGAGAAGGAATCATCAGGCGAAATGGATCAAGTTAATAACAACACTAGCGTTGCTTGTGATGACAGTGATCAGACTACTACGGCGGGTTCAAGCCGGCCGTCGCCTGGTCAGTCATCGTCGAGTTTAGCCACCACAGGAGGCTGCCACGAATCAAGCTTGATAGTGGAAGATGATGATAATGATGAGTTTGCTTTTCTGAATGCATTAGCAGACGTAAATTTCTGGACAGATCCTTATGTGGCTGACATTTTATGTGACCCTACCCAAACAGCAGCCTCAATCCCACCCTTGTTAACTGATCATCAACCCGATTACTTTACCATGGATCCATCGTGTGATGCACTGCTTTGGACTCCTCACAATCTTGTTTACGATCAGTATTCTGGCTTATTCTCTTGA 783 0.4598 MVRTPSCDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNIKRGNYTPEEEQLIIQLHQQQGNRWSAIAAKLQGRTDNDIKNYWHTNLKKKIQDKSGKQQAQAEEKESSGEMDQVNNNTSVACDDSDQTTTAGSSRPSPGQSSSSLATTGGCHESSLIVEDDDNDEFAFLNALADVNFWTDPYVADILCDPTQTAASIPPLLTDHQPDYFTMDPSCDALLWTPHNLVYDQYSGLFS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0460 260 MobiDBLite consensus disorder prediction 115 174 - -
Alju02g0460 260 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju02g0460 260 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju02g0460 260 CDD SANT 16 61 IPR001005 -
Alju02g0460 260 Gene3D - 6 66 - -
Alju02g0460 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g0460 260 Gene3D - 69 143 - -
Alju02g0460 260 SMART sant 66 114 IPR001005 -
Alju02g0460 260 SMART sant 13 63 IPR001005 -
Alju02g0460 260 MobiDBLite consensus disorder prediction 136 174 - -
Alju02g0460 260 MobiDBLite consensus disorder prediction 115 135 - -
Alju02g0460 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju02g0460 260 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g0460 260 Coils Coil 122 142 - -
Alju02g0460 260 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 169 - -
Alju02g0460 260 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g0460 260 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju02g0460 260 FunFam Transcription factor RAX3 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0460 Alju-ChrAlju02 3399965 3401001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0460 1 210 MYB Transcription Factor Family AT2G31180 46.190 3.13e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g0460 Myb_DNA-binding 1e-13 CL0123