Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0458 ATGTGTAACGAGAATTCCATGCCATCTTGTACTTGTTTACCTGGCTTTGAGACGAAGTTCCAAAGTAATTGGACTCTGAAGGATTACTCAGGTGGCTGTGTGAGGAGAACAAAGTTGCAATGTGAGGACTCCAATTCTTCAAACGGAAAGAAGGACAAGTTCCAAGCAATGCCCAGCATGAAATTACCTGAAACTTCATTACCTGCGACATCACGAAATGCAGAGGAATGCCGATCAATCTGCTTGAGCAATTGTTCCTGTGCTGCTTATGCATATGATAGTAATGGGTGTTCAGTTTGGCACGGTGATCTCTTAAATCTGCAACAACTTTCCCAAGATGATAGCAATGGAGGAACTTTGTATCTCAGGCTTGCAGCTTCCGAGCTCCCTGACGCTAAAAATAATAAGGGGATGATTATTGGTATTGTTGCAGGCTTGGTGGGAGGTATAGGGGTTCTCGTAACTATTCTTCTACTTGTGTTGCTGAGGCGAAGAAAGACAACTGTTCGGACAGGAAAATCCGTGGACGGTTCATTGATGGCATATGGGTATAGAGATTTGCAAAACGCGACAAGGAATTTCTCAGAAAAGTTGGGAGGAGGAGGTTTTGGTTCTGTATTTAAAGGAACATTGCCGGATTCTTGTGTTATAGCAGTGAAGAAGCTTGAAAGCATTGGCCAAGGTGAGAAGCAGTTCCGTACAGAAGTCAGTACAATTGGAACAATCCAGCATGTAAATTTGGTCCGACTTAGAGGGTTTTGTTCTGAAGGAGCGAGAAAACTACTTGTCTATGATTACATGCCAAATAGTTCTTTGGATTCCCATCTATTTCGGGAAAAGAACTCTAAGCTAGTTGGACGAGATTTTAGCAGGGTTCTGACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATATCCGGGGTGGCTATCACAGCCAAAGCTGATGTCTATAGCTATGGCATGATGCTTTTTGAATTTTTATCGGGTAGAAGAAACTCTGAGCCATCTGAAGATGGTCAAGTTAAGTTTTTTCCTTCATGGGCTACAAATGTTGTAGTCCAAGGTGGAAATATGCTTAGCCTATTAGACCCAAGCTTGAAGGGAAATGCAGACATGGATGAGGTGGCAAGAATTGTAAAAGTTGCAGCTTGGTGTGTCCAAGATGATGAAACTCACAGGCCATCCATGGGTCAGGTGGTTCAAATTCTTGAGGGGGTGTTGGATGTGAATTTGCCTCCAGTTCCAAGATCCCTCCGATTGTTTGTTGAGGACCAGGCGAACATAGTGTTCTTCACTGATTCAAACTCAAGCTCCGATCAAAGCTCACAGGCAAGGAGCTACGTTTGA 1356 0.4358 MCNENSMPSCTCLPGFETKFQSNWTLKDYSGGCVRRTKLQCEDSNSSNGKKDKFQAMPSMKLPETSLPATSRNAEECRSICLSNCSCAAYAYDSNGCSVWHGDLLNLQQLSQDDSNGGTLYLRLAASELPDAKNNKGMIIGIVAGLVGGIGVLVTILLLVLLRRRKTTVRTGKSVDGSLMAYGYRDLQNATRNFSEKLGGGGFGSVFKGTLPDSCVIAVKKLESIGQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGARKLLVYDYMPNSSLDSHLFREKNSKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFLSGRRNSEPSEDGQVKFFPSWATNVVVQGGNMLSLLDPSLKGNADMDEVARIVKVAAWCVQDDETHRPSMGQVVQILEGVLDVNLPPVPRSLRLFVEDQANIVFFTDSNSSSDQSSQARSYV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0458 451 Pfam Protein tyrosine and serine/threonine kinase 194 286 IPR001245 GO:0004672|GO:0006468
Alju02g0458 451 SUPERFAMILY Protein kinase-like (PK-like) 177 440 IPR011009 -
Alju02g0458 451 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524
Alju02g0458 451 SMART ntp_6 49 124 IPR003609 -
Alju02g0458 451 SUPERFAMILY Hairpin loop containing domain-like 51 110 - -
Alju02g0458 451 Gene3D Phosphorylase Kinase; domain 1 159 266 - -
Alju02g0458 451 FunFam Serine/threonine-protein kinase 159 266 - -
Alju02g0458 451 Gene3D Transferase(Phosphotransferase) domain 1 267 414 - -
Alju02g0458 451 PANTHER OS07G0415500 PROTEIN 3 282 - -
Alju02g0458 451 Pfam PAN-like domain 49 106 IPR003609 -
Alju02g0458 451 ProSiteProfiles PAN/Apple domain profile. 41 125 IPR003609 -
Alju02g0458 451 Gene3D Hepatocyte Growth Factor 45 125 - -
Alju02g0458 451 Pfam Protein kinase domain 293 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0458 451 CDD PAN_AP_plant 37 125 - -
Alju02g0458 451 ProSiteProfiles Protein kinase domain profile. 192 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0458 Alju-ChrAlju02 3377644 3379167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0458 132 413 Receptor kinase-like Gene Family AT1G56120 34.111 4.35e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju02g0458 Pkinase 7.9e-11 CL0016