Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0452 ATGAGGAGATCGGCTTTGATTCTGTGGGAGTCAACATTTCTTCATGTTCTCCCTTTCGGAACTAACCTAAAGTCTTCTTCTGTCGCCTTTGATGCGATGGCCCTTAAATTTCAGCGAGTTGCCTTCTCTTTTTCTTCTTTTCTTCTCAAAGCTAACGCATCCTGGCTGATAAGAGAGAGAAAGAGAAGAGAAAACTCCAAAAGAACCCGGGAGAACAAGAAAATCAGGAGACCAAACATTATCTCAGCTTCAGCGGCAGAGATGAAGAATTGTGAGCTGTGCAAGGCTCCGGCAAGGACCTACTGCGAGTCCGACCAGGCTAGCTTGTGTTGGGAATGCGACGCTAAGGTCCATGGAGCCAACTTCTTGGTAACCAGGCACTCCAGGACTCTTCTCTGTCATGCGTGTCAGTCTCTAACTCCATGGAAAGCCTCTGGTGCCAAGCTCGGAAACACCCTTTCTCTCTGCGAGGGTTGTGCCGACGGAATGAAGGATGCTGGCGAAGGTGACGAGAGCGAAGATGGAAATGACGACGACGTAGACACAGAGGACGATCTTGACGATGAAGACGACGGTGGTGGTGGAGATGAGGACGGAGATAATCAGGTAGTTCCCTTGTCCTCCACACCGCCTCCGCCGGCTTCAAACTCATCCAGCAGTGAAGAGTCAATTAGCAGATGTAATAGCAGCAATAGAGTTGTTTCTGAAACGGCGAGCACAATATCGTTGAAACGAAAGCATGAGGATGGATCGGACCTTAATTTCCAGGATCGTTGGAAGTGGTGGCGTAATAAAGATGGGAAAGCCGGGGAGCTAAAAAAGCAGGTGGCATGGTTAGAATGTGAAAGGGGCGAAGGAACGTCGGAGGAATTGCCGAGAGGCAGAGAGATCGGACCGGCGGCCTCGAAGGGATCGAGTGATGCTAAAACGCCGGAAGCCGTTTGA 945 0.5026 MRRSALILWESTFLHVLPFGTNLKSSSVAFDAMALKFQRVAFSFSSFLLKANASWLIRERKRRENSKRTRENKKIRRPNIISASAAEMKNCELCKAPARTYCESDQASLCWECDAKVHGANFLVTRHSRTLLCHACQSLTPWKASGAKLGNTLSLCEGCADGMKDAGEGDESEDGNDDDVDTEDDLDDEDDGGGGDEDGDNQVVPLSSTPPPPASNSSSSEESISRCNSSNRVVSETASTISLKRKHEDGSDLNFQDRWKWWRNKDGKAGELKKQVAWLECERGEGTSEELPRGREIGPAASKGSSDAKTPEAV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0452 314 ProSiteProfiles Zinc finger B-box type profile. 86 132 IPR000315 GO:0008270
Alju02g0452 314 Pfam B-box zinc finger 87 129 IPR000315 GO:0008270
Alju02g0452 314 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 90 250 - -
Alju02g0452 314 MobiDBLite consensus disorder prediction 284 314 - -
Alju02g0452 314 MobiDBLite consensus disorder prediction 213 239 - -
Alju02g0452 314 CDD Bbox1_BBX-like 91 132 - -
Alju02g0452 314 MobiDBLite consensus disorder prediction 164 239 - -
Alju02g0452 314 MobiDBLite consensus disorder prediction 167 197 - -
Alju02g0452 314 SMART bboxneu5 86 132 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0452 Alju-ChrAlju02 3336816 3341208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0452 89 194 C2C2-CO-like Transcription Factor Family AT4G27310 56.637 2.68e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g0452 zf-B_box 6.5e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0452 02 3336816 3341208 Alju10g0630 10 5205036 5205741 CCT
Alju02g0452 02 3336816 3341208 Alju02g0452 02 3336816 3341208 ECH