Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0446 ATGTTAATTACCTTGTTCTGTGCTTTCCTGTTCAATCAATCAACTGAATTCCTAAATTTTTGCTCCCTTTCTTTTATTTGCAATTGCTTACTGTCAAAAGCAGAGGAACTGATTTGCATTACTCCCGGCGATCTTCGCGGCTCTCAGGTCCCAGTCCAGAATTCCCAGACATCCTCGTTAAACATTGAACATAACGACGGCGAATGTAACGAAGACTCCTTGGGAGTCAACGCTCCTGGCTCCATCCCTCAACCACAGGAGCGAAGTTGCATGCAGAAATTAGAGAAAGCCCATACTAAAGGGGATGGATCTAAGTCCCTGGCAGAGAAGCTGGCGAGATGGAAAGAATATAATGCCCAGCTTGATTCCTGCAATGATGCAGATAAGCCAATTCGCAAAGTTCCTGCCAAAGGATCAAAGAAGGGATGCATGAAAGGTAAAGGAGGGCCTGAGAACTCTCGTTGTAACTACAGGGGCGTGAGGCAGAGGACATGGGGCAAGTGGGTTGCGGAAATTCGAGAGCCAAACAGAGGAAGTAGGCTCTGGTTGGGTACATTCCCCACTGCCATTGCAGCTGCTCTTGCCTATGATGAAGCAGCAAGAGCAATGTATGGTTCTTTTGCTCGCCTCAACTTTCCCAATGTTTCAGTCCCCAATTTTTCTATTGAATCTTCAAGAGATTCACTACTTGCAAGTCAATCTGATTCTGCAGTGCCAACTGAGTCTGGGATCTCCCCAACCAATTCTGGCTTTGGTGGGTTGGATAATACCGACAAGAAACCTGTTCCCTTGAATGTAAAAGTTGAGGAGGTGGAAGTTGAATTGAGGATCAATTCCTCTACGCTTTCATGA 852 0.4601 MLITLFCAFLFNQSTEFLNFCSLSFICNCLLSKAEELICITPGDLRGSQVPVQNSQTSSLNIEHNDGECNEDSLGVNAPGSIPQPQERSCMQKLEKAHTKGDGSKSLAEKLARWKEYNAQLDSCNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIAAALAYDEAARAMYGSFARLNFPNVSVPNFSIESSRDSLLASQSDSAVPTESGISPTNSGFGGLDNTDKKPVPLNVKVEEVEVELRINSSTLS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0446 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 92 242 - -
Alju02g0446 283 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Alju02g0446 283 PRINTS Ethylene responsive element binding protein signature 179 195 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 Pfam AP2 domain 155 205 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 FunFam Ethylene-responsive transcription factor 2 155 214 - -
Alju02g0446 283 CDD AP2 155 215 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 SUPERFAMILY DNA-binding domain 156 213 IPR016177 GO:0003677
Alju02g0446 283 SMART rav1_2 156 219 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 MobiDBLite consensus disorder prediction 128 151 - -
Alju02g0446 283 MobiDBLite consensus disorder prediction 232 254 - -
Alju02g0446 283 ProSiteProfiles AP2/ERF domain profile. 156 213 IPR001471 GO:0003700|GO:0006355
Alju02g0446 283 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0446 Alju-ChrAlju02 3301328 3306167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0446 100 213 AP2-EREBP Transcription Factor Family AT2G40350 65.254 6.02e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g0446 AP2 2.4e-14 CL0081