Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0433 ATGATGGACATCGACTCCTCACACACCTCCAATTGGCTCTGTGACTATGGCTTTGATGTCTCTGTTGCCGGTGCTGAATTCCCGGTCGTCCCTTCCGGCGGTTTCAACTGGGTTTCTCCTACTTTCCACGGTTCTTCCGATACGAGCTTGGACCTGGAATACTCACTGGACAATTCAACTCTCATGGAAAATGGCCCTTCAAAGCGGTTGAAGACTGAATCATGTGCATCAGGCTCCAAGGCATGCCGTGAGAAACTGCGGAGGGATAGACTGAATGAGAGGTTCCTGGAATTGAGTTCTATCTTGGAGCCTGGTAAGCTGCCTAAGACGGATAAGGCTGCTATTTTAAGTGATGCAGTTCGAATGATGACAGAACTGCGAAGTGAAGCCCAGAAGCTGAAGGAAACAAATGATGAACTGCTTGAAAAGATCAAGGAACTGAAGGCAGAGAAGAATGAGCTTCGTGATGAGAAGAATAGGCTGAAGATGGACAAAGAAAAGCTGGAGCAACAGGTGAAAGGGATGAATGCACAGCCGACCTATCTTTCTCACCCTTCTGCTGCATTTACTGCTCAAGGCCAAACTGGCAGCCATAAGCTCATACCTTTTGTTGGCTATCCTGGAATCGGCATGTGGCAGTTTTTGCCACCTGCTACTGTTGATACGTCTCAGGATCATCTGCTTCGCCCTCCTGTCGCTTAA 702 0.4829 MMDIDSSHTSNWLCDYGFDVSVAGAEFPVVPSGGFNWVSPTFHGSSDTSLDLEYSLDNSTLMENGPSKRLKTESCASGSKACREKLRRDRLNERFLELSSILEPGKLPKTDKAAILSDAVRMMTELRSEAQKLKETNDELLEKIKELKAEKNELRDEKNRLKMDKEKLEQQVKGMNAQPTYLSHPSAAFTAQGQTGSHKLIPFVGYPGIGMWQFLPPATVDTSQDHLLRPPVA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0433 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Alju02g0433 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
Alju02g0433 233 SMART finulus 81 132 IPR011598 GO:0046983
Alju02g0433 233 Gene3D arf6 gtpase in complex with a specific effector, jip4 125 179 - -
Alju02g0433 233 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Alju02g0433 233 CDD bHLH_AtILR3_like 80 155 - -
Alju02g0433 233 Coils Coil 116 178 - -
Alju02g0433 233 FunFam Transcription factor bHLH104 78 159 - -
Alju02g0433 233 PANTHER BHLH TRANSCRIPTION FACTOR 6 233 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Alju02g0433 233 Gene3D - 67 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0433 Alju-ChrAlju02 3210966 3213952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0433 6 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 55.508 2.44e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g0433 HLH 2.4e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0433 02 3210966 3213952 Alju02g0433 02 3210966 3213952 ECH