Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0428 ATGGATCCTCTGTGCGAGTTATGTGTAGGAGTAAGAGCTGTGGTATATTGCAAGTGTGATTCTGCGCGTCTCTGCTTCAACTGTGATGCTTATGCACACTCCGCCAACCCACTGTCACGCAGGCATCCTCGTTCGCTGATATGTGACAAATGTCTCTCCCAACCAGCGATTGTCCGCTGCATGGATGATAAAATGTCTGTGTGCCAAGGTTGTGATTGTAATCGAGATGTCTGTCTGGGATTGGGACACAGGCGTATGATGTTGATTAGTTACACAGGTTGTCCCTCTTTTGCTGACATGTGTAGGATCTGGCCTTTTGCTTTTGACTCTACCTCAGGTGGTTTAGGTTTGGCTCATAGTTGGGGATCGTTTAATTCTTTGCCTAAGAGCCAAAGCCAGTGTTTGGTGCCGCTAGATGACAATGATGCATCCTTCGGTGACAAGTCGAGCGAGCTTGAATCGTGTGCAAAGTATGAGCCTGAGATGGCTCAATCTTCTATCCTTCAACCAAATCCAGATTTCATGCCCTACTGCAGAGATCAACCAGTTTTACTTCCTCAAGGCTCTAACCTCCAGCCAAAGGGATGTCACGATTCGAAGGATATTGGGATTTCTGAGGCTAATGACCTCTGTGAAGGTCTCAACATGGACAGTGTTCAATTAAACTTGGACGGTGCTAATGAAATATTTGATTGCTCTCAAGATGCCGCTGGTTACCAGGTTGAGGATGGAGGATTGGATTGTCTGTTAATGGAAAAGAACATATCAGTTACCGAACCTAATGGCCTTTTTCAGAATGCCATGGAGGCATCATCATCAGTAGTCCAGCAAGGTTGTGTGGGTTTTCAATCATCTAGGGAAGTGGGATCAGGTTCTATCATCCAGGGCAATACAAACTGCGTCCTCATGGATACTAGCTGCAACGCAAAAATGAATCTGGGATTTCCTTCTCAGGGTCAAGTTCATTCAAGCACACCACTTTCATTACCCACCATGAATTGTAATAGTGACACTACCACTACGGGTTTTCAGGATTGCGCCACTTCTGAGTTTCAAGATTGTGGGTTATCTCCACCACTGTTGCCAGTAGATACGCCATGGGAATCAAATTTGAAGTCTTCATGCCCACAAGCAAGGGAGAAAGCTAAAGTAAGGTACTTTGAGAAAAAGAAGACTCGAACGTTTAGTAAACAAATAAGGTACGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGGGTAAAAGGTAGATTTGTGAAAGCAGAAGAGGAATATGATTATAATATCCTCTCTTGA 1296 0.446 MDPLCELCVGVRAVVYCKCDSARLCFNCDAYAHSANPLSRRHPRSLICDKCLSQPAIVRCMDDKMSVCQGCDCNRDVCLGLGHRRMMLISYTGCPSFADMCRIWPFAFDSTSGGLGLAHSWGSFNSLPKSQSQCLVPLDDNDASFGDKSSELESCAKYEPEMAQSSILQPNPDFMPYCRDQPVLLPQGSNLQPKGCHDSKDIGISEANDLCEGLNMDSVQLNLDGANEIFDCSQDAAGYQVEDGGLDCLLMEKNISVTEPNGLFQNAMEASSSVVQQGCVGFQSSREVGSGSIIQGNTNCVLMDTSCNAKMNLGFPSQGQVHSSTPLSLPTMNCNSDTTTTGFQDCATSEFQDCGLSPPLLPVDTPWESNLKSSCPQAREKAKVRYFEKKKTRTFSKQIRYASRKARADTRKRVKGRFVKAEEEYDYNILS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0428 431 ProSiteProfiles CCT domain profile. 379 421 IPR010402 GO:0005515
Alju02g0428 431 CDD Bbox1_BBX-like 4 47 - -
Alju02g0428 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 424 - -
Alju02g0428 431 SMART bboxneu5 1 47 IPR000315 GO:0008270
Alju02g0428 431 Pfam CCT motif 379 421 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0428 Alju-ChrAlju02 3188355 3190082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0428 1 428 C2C2-CO-like Transcription Factor Family AT3G21880 37.963 5.49e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g0428 CCT 1.2e-15 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0428 02 3188355 3190082 Alju02g0428 02 3188355 3190082 ECH