Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0425 ATGGAGTCTTTTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCCTCACCTCTTCAAGTTCAGGAATACTATCATAAGCTTTTATCCACAAGGAAGTGCAGTAGTATCTTAGTCAAACACGATGGAAATTTTGGAAAGGGTGTGTATGCTGCCGTCGACTTCAATGAAGGGGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGAGTTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTCCTGCTTTCGCTTTATTGGTTCAGTAGAACTTCAAATTGGAAGGAGGCTTTACTTGCAAGAATTAGGGGCTTCTGAGAGTCATGGTTGTGATATGATTATGAGCGACTCTTCAAACACATCAAAATACAACAAAGACACAGATTCATCTGATGGAGGAGAGAATTCATATGAAAAAATGGAGGATGGCGCTGGGGAATGTAGTTTTGGCGGTTCTGAAGCTAAAGTTCATCTCCCTGAAGGTGTTGTTCAATCATTAATGAACAGCCATATGATGCTGCCTTACTCTAAGGAGTTCTCCATGCCACCAGCTTTTCCATGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCCTGTCATTCTTTGATTTGTACTGGTGAGAGGTCTGATACAGCACGTAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCATAAGTTGCAAGAAAGGCGTCTTTTAGAGAAAGGTAAACATGGTAAATCACATCTTTCAAACCATTGTGATCTCACTATTCTTTCAGAGGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATATTCATTCTTCTGATGAAGTTGCATTCAGGATGCAAATAAGAGATTTGGCGTTTGAGTCACTCCAACTTCTAAAGACAGCTATATTTGACAGAGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTGGTAGCTTCTCCTGTGGAGGATTACTTTCTATACATCGACGATCTAACATATCCTGAAAAGGAAAAAGCAGAGGAAATTACACAACCAATTCTGGATGCTCTCGGTGAAGACTATTCCATTTGTTGCCAGGGGACTGCATTTTTTCCATTGCAAAGCTGCATGAACCATTCCTGCTGTCCTAATGCAAAGGCATTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACGATAATTGCTCTGAGGTCCATTCGTAAAGGAGAAGAGATAACCATCTCATATGTCGATGAGGATCTTCCATTCGAAGAGAGACAGGCTTCCCTTGCAGATTATGGTTTCAAATGCAGGTGTCCAAAGTGCGTTGAAGAACAACCATAG 1494 0.419 MESFCPIDSRCANEIAALLSPPSPLQVQEYYHKLLSTRKCSSILVKHDGNFGKGVYAAVDFNEGELVLKDQMLVGVQHSSNKIDCFVCSSCFRFIGSVELQIGRRLYLQELGASESHGCDMIMSDSSNTSKYNKDTDSSDGGENSYEKMEDGAGECSFGGSEAKVHLPEGVVQSLMNSHMMLPYSKEFSMPPAFPCPGGCGESFYCSTSCAEADWESCHSLICTGERSDTARREALLKFIKHANETNDIFLLAAKAISSTILRYHKLQERRLLEKGKHGKSHLSNHCDLTILSEAWRPIAMGHKRRWWDCIALPDDIHSSDEVAFRMQIRDLAFESLQLLKTAIFDRECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLTYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALRSIRKGEEITISYVDEDLPFEERQASLADYGFKCRCPKCVEEQP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0425 497 MobiDBLite consensus disorder prediction 136 150 - -
Alju02g0425 497 ProSiteProfiles SET domain profile. 33 467 IPR001214 GO:0005515
Alju02g0425 497 SMART set_7 41 473 IPR001214 GO:0005515
Alju02g0425 497 Pfam SET domain 52 466 IPR001214 GO:0005515
Alju02g0425 497 SUPERFAMILY HIT/MYND zinc finger-like 194 224 - -
Alju02g0425 497 CDD SET_SMYD 406 492 - -
Alju02g0425 497 Gene3D SET domain 388 496 IPR046341 -
Alju02g0425 497 SUPERFAMILY SET domain 37 492 IPR046341 -
Alju02g0425 497 MobiDBLite consensus disorder prediction 127 153 - -
Alju02g0425 497 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 496 IPR044237 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0425 Alju-ChrAlju02 3154330 3160347 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju02g0425 SET 6.7e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0425 02 3154330 3160347 Alju02g0425 02 3154330 3160347 ECH