Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0424 ATGGTCGAAAGGAAGCAGTTCAAGACCAGGCTATGTGTGCCGTATCAGAAAGGCCGCTGTCCACGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGCTGCGGCGATTCTCTGGCTCATATAGTGGTAGGCAAGACTATTCAGGTAGTGACTTGAGAGGAAAACTTGAAAGAAGGCATTTATCACCTCGCAGGTTATCACCGGCAAGAGATGCAAGGAGCCGCCATAACATTCATGATTACAGCCCTGGGAGGTCCTTCGAGAAGAGAAGTGATAGGAAGCGCAAGAGAGACAAGGGCATTGCAGGCCAAAGTGATGTTTCTGGAGGTTTGAAATTCTCTGATAGAATCCAAGATAAAGTTAGAGAAGGAAAAGTACATTCCTCTGCTTCAAAAAATAGTCTTGAGGAGCAGCTGAAGAAAGTACAGTCGGAAATCAACATTCTTGACCAGCAAAAGTATCAGCTTGAGGTCTACTTGGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAATTATATAAAGAGAATGAAGAATGTAAAAGGGTCTCATCAAAAATAAGGAAGTTTATCAAAGCGCATAATCATAACACCCGATTACAAGATGAATTAAAGAGATCACAGGCTCGACTTCAAAGGTTGGGAGATCAGCTTGACTCGGACATTGCCAGAATTGGTGTCAATGAAGAAGACTTGAGCATTGATATTGTAAGCAATGCTGAGGACGTAGGTTTTCCATCCATCACCAAAGATAATGTGGAGCAGAATGATGCTTCCCCGCACAGGAAAAGGCTGCCTGTTGGCCATGATGCTGCTGAAGATACAAAACAAGTCAGAACTAGGAAGCGTTCTCGGTGGAATTTGGCTGCTGAGTCAAACGAAAAGGGTGATGAGTGCCCTGCGGCCGCAGATAATGGGACTCAAGTGACCAAGTCCCTTAATATTGAAGGCTGGCCAAAAAATGGAACACCTAGTTCTTCTGGCAACCTCAGCTTAGAAAAGTTGAAGGAAAGTAGGGCTGGTGTGCCATTAACCAGCATGGCTGCTCATGTGGTTGATGAGGAAGTTGACATTGAGCTTGATGATAAAATTGAGAAAACTGAAACTGCTCCCGCAGAAATTGAGAATGAAGTGGCATTTAAGGGGAGGAGTTTCCCACTGCTTCCCCCAACTCTGACTTCTGGAACGAATTATTCACGGTATGAGGGTGATGATCAGAATGTGGATGTGGATGTGGATGGGCTTGATGAAGAGGCAGCAATTACACGCATGGATATAGTCTAA 1308 0.445 MVERKQFKTRLCVPYQKGRCPRQNCTFAHGNAELRRFSGSYSGRQDYSGSDLRGKLERRHLSPRRLSPARDARSRHNIHDYSPGRSFEKRSDRKRKRDKGIAGQSDVSGGLKFSDRIQDKVREGKVHSSASKNSLEEQLKKVQSEINILDQQKYQLEVYLDESVQEVDSLNSRIQELEAQLYKENEECKRVSSKIRKFIKAHNHNTRLQDELKRSQARLQRLGDQLDSDIARIGVNEEDLSIDIVSNAEDVGFPSITKDNVEQNDASPHRKRLPVGHDAAEDTKQVRTRKRSRWNLAAESNEKGDECPAAADNGTQVTKSLNIEGWPKNGTPSSSGNLSLEKLKESRAGVPLTSMAAHVVDEEVDIELDDKIEKTETAPAEIENEVAFKGRSFPLLPPTLTSGTNYSRYEGDDQNVDVDVDGLDEEAAITRMDIV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0424 435 SUPERFAMILY Troponin coil-coiled subunits 123 198 IPR038077 -
Alju02g0424 435 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Alju02g0424 435 MobiDBLite consensus disorder prediction 254 312 - -
Alju02g0424 435 Gene3D - 1 36 - -
Alju02g0424 435 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 420 IPR045868 GO:0046872
Alju02g0424 435 MobiDBLite consensus disorder prediction 263 300 - -
Alju02g0424 435 Coils Coil 132 152 - -
Alju02g0424 435 MobiDBLite consensus disorder prediction 39 114 - -
Alju02g0424 435 Coils Coil 160 194 - -
Alju02g0424 435 Coils Coil 205 225 - -
Alju02g0424 435 MobiDBLite consensus disorder prediction 50 102 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju02g0424 None None None