Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0415 ATGCCTGCGGGCATGATGATTCCGGCCAGAAATATGACCTCGGTGATCGGAAGGAACGGCAACGTTGGTGCGTTGGGATCATCCTCAGGTCTCACTCTCAGCCAGCCAAACATGATGGAAGGTCATCAGCTGCTCCCACTGGACATGGCTCCCAACACCTCCGAGAGCGATGTCGTCCCCCGCATCCGAGACGACGACTTCGACAACGCCACCAAGTCCGGCAGTGAAAACCAGGAAGCCGCCTCCGGCGACGACCACGATCCCCGCCCCAATAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGGGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTTCAAAACAAGCGAACTCAGATGAAGACCCAACATGAGCGGCAAGAGAACTCACAACTTAGAGCCGAGAATGAGAAGCTTAGAGCAGACAACATGAGGTATAGGGAAGCTCTTAACAATGCCTCGTGTCCAAATTGCGGTGGACCAACTGCTATAGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATGGAAAATGCTCGCCTACGAGAAGAGATTGATAGGATATCAGCAATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTATCCACTGCTTTCCCCAACAAGTATTCCTGCGAGGCCACTGGAACTGGGTGGTTTTGGTGGGGATGTATATGGAGGTGGAGATGTTGTTAGGTCTATGAGTGGGCCCAGCGAAGCTGATAAGCCGGTGATAATAGAGCTGGCTGTGGCTGCCATGGAAGAGCTTGTGAGGATGGCTCAAATGGGTGACCCCTTATGGATGATCACTCTTGATGGAACTTCCTCTGTGCTTAACGAAGACGAATATATCAGAAGTTTCCCTCGTGGGATTGGTCCAAAACCTGCTGGGTTCAAGTGTGAAGCTTCACGAGAAACTGCTGTTGTCATCATGAACCATATTAGTCTTGTTGAGATTCTCATGGATGTGAATCAATGGACCACAGTGTTCTCGGGTATAGTCTCAAGAGCGATGACACTGGAAGTATTATCAACTGGGGTGGCTGGGAACTACAATGGAGCCCTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTCTAGTGCCAACTCGAGAGAGTTATTTTGTAAGATACTGCAAACATCACGGGGAAGGGACATGGGCAGTGGTGGATGTCTCGCTGGATAATTTGCGTCCTAGCCCTTCTGTTAGATGTAGAAGAAGACCGTCCGGTTGCTTAATTCATGAAATGCCTAATGGCTACTCCAAGGTGACGTGGGTTGAGCATGTAGAGGTGGACGACAGAGGAGTTCATGATCTATACAAGCAGCTCGTGAGCTGTGGACATGCTTTTGGGGCAAAACGTTGGGTGGCCACCTTGGATCGACAATGTGAAAGGCTTGCTAGTTCCATGGCTACCAGTATTCCTACCGGTGATGTTGGAGTGATAACCAATCAAGAAGGAAGGAAGAGTATGCTGAAACTGGCGGAGAGAATGGTGATGAGTTTTTGTGCAGGAGTGAGCGCCACTACTGCTCACACGTGGACTACACTGTCCGGAACTGGGGCTGACGACGTACGGGTCATGACCCGTAAGAGTGTGGATGACCCAGGAAGGCCTCCTGGCATTGTTCTCAGCGCTGCAACTTCTTTTTGGCTACCAGTTCCTCCTAACAGAGTTTTTGATTTCCTCCGTGATGAGAATTCCAGAAATGAGTGGGACATTCTTTCGAATGGCGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGCCAGGACACGGGGAATTGTGTCTCTCTACTTCGAGTAAATAGTGCGAATTCAAGCCAAAGCAACATGTTAATACTGCAAGAAAGCTGCAGAGACACAACGGGGTCGTTTGTGGTATATGCACCAGTGGATATAGCTGCAATGAACTTGGTTCTAAATGGAGGTGACCCTGACTACGTTGCCCTTCTTCCTTCTGGATTTGCTATACTTCCAGATGGAACCACGGCACATGGTGGATCTCTCTTAACTGTTGCATTCCAAATTTTGGTGGACTCAGTCCCCACAGCCAAACTCTCTCTTGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATTAAGGCCTCTTTATCCTGTGAACCTGCTGCCTAA 2241 0.4935 MPAGMMIPARNMTSVIGRNGNVGALGSSSGLTLSQPNMMEGHQLLPLDMAPNTSESDVVPRIRDDDFDNATKSGSENQEAASGDDHDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALNNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISAIAAKYVGKPVVNYPLLSPTSIPARPLELGGFGGDVYGGGDVVRSMSGPSEADKPVIIELAVAAMEELVRMAQMGDPLWMITLDGTSSVLNEDEYIRSFPRGIGPKPAGFKCEASRETAVVIMNHISLVEILMDVNQWTTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPTRESYFVRYCKHHGEGTWAVVDVSLDNLRPSPSVRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSCGHAFGAKRWVATLDRQCERLASSMATSIPTGDVGVITNQEGRKSMLKLAERMVMSFCAGVSATTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDTTGSFVVYAPVDIAAMNLVLNGGDPDYVALLPSGFAILPDGTTAHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEPAA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0415 746 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Alju02g0415 746 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 91 740 IPR042160 -
Alju02g0415 746 FunFam Homeobox-leucine zipper protein GLABRA 2 275 494 - -
Alju02g0415 746 Pfam Homeodomain 93 148 IPR001356 GO:0003677
Alju02g0415 746 SUPERFAMILY Bet v1-like 514 737 - -
Alju02g0415 746 SMART HOX_1 91 154 IPR001356 GO:0003677
Alju02g0415 746 Gene3D - 330 479 IPR023393 -
Alju02g0415 746 FunFam Homeobox-leucine zipper protein HDG1 78 166 - -
Alju02g0415 746 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Alju02g0415 746 MobiDBLite consensus disorder prediction 58 72 - -
Alju02g0415 746 MobiDBLite consensus disorder prediction 47 101 - -
Alju02g0415 746 CDD START_ArGLABRA2_like 270 494 - -
Alju02g0415 746 SUPERFAMILY Bet v1-like 268 497 - -
Alju02g0415 746 SUPERFAMILY Homeodomain-like 83 150 IPR009057 -
Alju02g0415 746 SMART START_1 275 495 IPR002913 GO:0008289
Alju02g0415 746 Gene3D - 78 167 - -
Alju02g0415 746 ProSiteProfiles START domain profile. 266 498 IPR002913 GO:0008289
Alju02g0415 746 CDD homeodomain 93 151 IPR001356 GO:0003677
Alju02g0415 746 Coils Coil 149 176 - -
Alju02g0415 746 Pfam START domain 276 495 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0415 Alju-ChrAlju02 3104661 3108419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0415 62 745 Homeobox Transcription Factor Family AT1G05230 80.891 0.0 1155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju02g0415 START 3.4e-58 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0415 02 3104661 3108419 Alju10g0579 10 4768843 4772807 CCT
Alju02g0415 02 3104661 3108419 Alju02g0415 02 3104661 3108419 ECH