Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0412 ATGGCTGTGGCTCCAACGCTATTCCTCCTGGTTTTCTGGTTATGGATTCCCACAGAAGCTGTGGGTAGGACAGGGAATAGTACCATGACAAATAGTACAGTTTCTTCAAAACCGAATGTTGTGAGAATTGGAGTCCTGTTTACGTTTGATTCTGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCTGCTGATGATGTTCATTCTGATACAAGCATTCTCAGCGGGACAAAGCTGGAAATTATTTTACGTGATACCAACTGCAGTGGATTTCTTGGAATGGTAGAAGCTTTGCAGCTAATGGAGAATGATGTGGTTGCCGTGATCGGTCCACAGTCCTCTGGGATAGCTCATGTGACCTCTCATGTTGTTAATGAGCTTCATTTACCTCTTCTCTCATTTGGGGCAACAGATCCTACTCTTTCTTCTCTGCAGTACCCTTATTTCGTCCGCACTACGCAAAATGATCACTTCCAGATGTATGCAGTTGCAGACTTGATTCATTACTATGGATGGAGTGAGGTAATAGCAATTTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGTACTGGGCGACGCGCTTGCACAGAAACGTGCCAGGATCTCCTACAAGGCCTCGTTCCCTCCGGATGCTTCCAGAACTGCCATAGATGACCTGTTAAATGGAGTGAATTTAATGGAATCACGGGTCTATGTTCTGCATGTGAATCCTGATTCAGGTCTGGCAATTTTCTCTCTGGCCAAAAAGCTTGGGATGATGACCAATGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTGCTTGATTCACAAGCACCAGCTAGCCTTGAGAGCTTGAATCTTTTACAAGGAGTTCTTGCATTTCGTCATCACACTCCTTATACTGATAGGAAAAATAATCTTCTCTCTAGGTTGAAGAAATTGAACTACACTAAGACTTCAGGCTTCAATTCTTATGCTTTGTATGCTTATGATTCTATCATGCTAGCTGCCCGTGCTTTGCATGAATTTCTCAATCATGGTGGAACCATTTCTTTCTCCAATGACCCTAACTTGCATGAAACTAATCGAAGTATGTTGCATTTATCATCGCTTCGAGCTTTCAATGATGGCCCCAAACTTCTCCAGACAATCCTGGGAATGAATTTCACTGGTGTTAGCGGTCAGATTCAGTTTGACAAGGACAAGAATTTGATTCGACAAGCATATGATATTATAAACATTGGTGCATCTGGACAACGTATCATTGGTTACTGGTCTAATCACTCTGGTCTTTCAGATGTAGTTCCTGAAGTCTTGTACTCAAAATCGCCTAACAAATCTACTGGCAATAAGCATCTGTCCAATGTGATATGGCCAGGACTGACTTCAATTACACCCAGAGGATGGGTATTCCCCAATAATGGAAGGCCACTGAGAATTGCAGTGCCAAATCGAGTAAGCTTCAGGGAGTTCGTTGGCAGAGACAAGGACCCTCCTGGGATAAAAGGTTTTTGCATCGATATCTTTGAAGCAGCGTTAAACTTAATGCCTTATCCTGTCCCCAGGCAGTATATACTATATGGACACGGTGATAGAAATCCTAACTATGATGAGCTTGTGAATCAGGTCGCACAAAATAATTATGAAGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGGACAAGGATTGTGGATTTCACTCAACCTTTCATGACTTCAGGGCTGGTTGTAGTTGTTCCTGTTAAAGAGGTAAAGTCAAGCCCCTGGTCTTTCCTTAAGCCATTTACGGCAGAAATGTGGTTCGTCACTGGTGCCTTTTTTCTTTTCGTGGGAGCTGTTGTGTGGATTCTTGAACATCGGCACAATCATGAGTTCCGAGGACGGCCCAGGAAACAACTTATGACAATTTTTTGGTTTAGCTTCTCAACAATGTTCTTCTCACACAGAGAGAACACAGTGAGTGCTCTAGGGAGATTGGTGCTGATCATTTGGCTATTTGTGGTGCTAATTATCAATTCAAGCTACACGGCTAGCTTGACATCCATACTCACAGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTCTCATCTCAACCAATCAACCAATCGGAGTTCAAGACGGGTCATTTGCCCGAAAGTATCTCATAGATGAGCTCAACATAGCCGAATCAAGAGTCGTCATATTGAAAAATCTGCAGGACTATATTGATGCCCTGACACGTGGACCCAGAAATGGAGGTGTGGTAGCCGTTGTGGATGAGCTTCCTTATATTGAGCTCCTCATGTCCAACACCAATTGTCAGTTCAGAACCGTAGGCCAAGAATTCACAAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCACTAGCGGTGGACATGTCAACGGCAATTCTGCAACTATCAGAGAATGGTGACCTGCAGAAGATTCATGACAAATGGTTGTTAAAGGACAAATGTTCAGCAACACAAAACGATGATGAAGATTCAAACCAGCTATCACTGAGAAGCTTCTGGGGGTTGTTCCTCATAAGTGGGGTGGCGTGTCTGCTTGCTTTGATTGCCTTCTGCATAAGGGTGTGTTGTCAGTTCGCAAAATTCGCGCCGGACACGGGTGAAGAGACCCACCACGAAATTCAGCCACTGCGCATGGCCAAGCCTAAACGCCCATGTCGCACTCCTAGCTTCAAGGACCTGATGGAGTTTGCTGATAAAAGAGAAGCTGAAATCAAAGAGCATCTCAGAAAAAAGAGTAATAAACGTCCACGCTCCCAAAGCTTGTTATTAGAGTAA 2799 0.4362 MAVAPTLFLLVFWLWIPTEAVGRTGNSTMTNSTVSSKPNVVRIGVLFTFDSVIGRSAKPAILAAADDVHSDTSILSGTKLEIILRDTNCSGFLGMVEALQLMENDVVAVIGPQSSGIAHVTSHVVNELHLPLLSFGATDPTLSSLQYPYFVRTTQNDHFQMYAVADLIHYYGWSEVIAIFVDDDNGRNGISVLGDALAQKRARISYKASFPPDASRTAIDDLLNGVNLMESRVYVLHVNPDSGLAIFSLAKKLGMMTNGYVWIATDWLPSVLDSQAPASLESLNLLQGVLAFRHHTPYTDRKNNLLSRLKKLNYTKTSGFNSYALYAYDSIMLAARALHEFLNHGGTISFSNDPNLHETNRSMLHLSSLRAFNDGPKLLQTILGMNFTGVSGQIQFDKDKNLIRQAYDIINIGASGQRIIGYWSNHSGLSDVVPEVLYSKSPNKSTGNKHLSNVIWPGLTSITPRGWVFPNNGRPLRIAVPNRVSFREFVGRDKDPPGIKGFCIDIFEAALNLMPYPVPRQYILYGHGDRNPNYDELVNQVAQNNYEAAVGDVTIVTNRTRIVDFTQPFMTSGLVVVVPVKEVKSSPWSFLKPFTAEMWFVTGAFFLFVGAVVWILEHRHNHEFRGRPRKQLMTIFWFSFSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISTNQPIGVQDGSFARKYLIDELNIAESRVVILKNLQDYIDALTRGPRNGGVVAVVDELPYIELLMSNTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKDKCSATQNDDEDSNQLSLRSFWGLFLISGVACLLALIAFCIRVCCQFAKFAPDTGEETHHEIQPLRMAKPKRPCRTPSFKDLMEFADKREAEIKEHLRKKSNKRPRSQSLLLE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0412 932 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
Alju02g0412 932 Gene3D - 708 822 - -
Alju02g0412 932 SMART GluR_14 477 819 IPR001320 GO:0015276|GO:0016020
Alju02g0412 932 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Alju02g0412 932 Pfam Bacterial extracellular solute-binding proteins, family 3 496 818 IPR001638 -
Alju02g0412 932 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 890 IPR015683 -
Alju02g0412 932 FunFam Glutamate receptor 471 587 - -
Alju02g0412 932 FunFam Glutamate receptor 713 821 - -
Alju02g0412 932 FunFam Glutamate receptor 156 320 - -
Alju02g0412 932 FunFam Glutamate receptor 587 717 - -
Alju02g0412 932 SUPERFAMILY Periplasmic binding protein-like II 453 820 - -
Alju02g0412 932 CDD GluR_Plant 474 817 - -
Alju02g0412 932 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Alju02g0412 932 PIRSF IGluLR_plant 2 930 IPR017103 -
Alju02g0412 932 Gene3D - 471 586 - -
Alju02g0412 932 Pfam Ligand-gated ion channel 819 851 IPR001320 GO:0015276|GO:0016020
Alju02g0412 932 Gene3D - 587 707 - -
Alju02g0412 932 Gene3D - 156 429 - -
Alju02g0412 932 Gene3D - 60 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0412 Alju-ChrAlju02 3093543 3097143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0412 37 784 Ion Channels AT1G05200 67.380 0.0 1087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0412 02 3093543 3097143 Alju10g0576 10 4746238 4752277 CCT
Alju02g0412 02 3093543 3097143 Alju02g0412 02 3093543 3097143 ECH