Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0410 ATGAAGGACTTTATGGCTGTGACTCGAATAATTTGGATTTGGATGATACTTTGTGGTCTTGCTCGTTGCCAAAGGCCAGTGTCTGTGAATATTGGTGCGGTTTTCACATTTGATTCGGTCATAGGTAAAGTTGCGAAGGTGGCGATGAAAATGGCCGTCGACGACGTCAATACAGACCCTCTAGTTCTTAATGGGACGAAACTGAATTTGATAATGGAGGATGCCAGTTGCAACGTCTTCCTGGGATCGATTGGAGCGTTCCGTGCACTTGAGCAGGGGGTTGCGGCCATAATTGGTCCACAATCATCTTCCATCGCTCACGCGATTTCTCAAATTACTGATGGACTTCAAGTGCCTCAAGTTTCCTATGCTGCCACTGATCCAACGCTGTCTTCCCTCCAGTTTCCTTTCTTTTTTCGTTCTATACCAAGTGATTCTGAGCAAATGGCTGCAGTGGCTGATTTAATTCAATTCTATGGATGGAAAGAGGTCATAGCCGTCTACTTGGATGATGATTATGGGAGAAATGGAATATCTTCTCTGGATGATGAGCTTGAAAAAAGGAGCATAAGGATGTCTCATAAGTTGCCTGTTAGCATTAACTTTGATCTGAATGAAATCACTAACTTGCTCAATCACTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCACGTCAACCCAGATCCTAGATTAAGGATTTTCAACATAGCCTACAAACTGAAGATGATGTCTAGTGACTTTGTCTGGCTTGCCACTGATTCCCTCTCTGCTACTCTAGACTCGTTCACCCCACAGAATCATTCCTCTCTCAGTGTTGTGCAAGGGGTGGTTGCACTTCGTCCTCACATTCCTGATTCTCCCCAGAAAAGATCTTTTGTTTCTCAGTGGACAAAAATGCAGAATGAAAGCACAGCAAGCATTGGGTTAAACCATTATGGATTTTTTGCGTACGATACAATTTGGACTGTCGCGCATTCAATTGACAAGTTTATTGAAATACACAAGAATATTACATTCTCAGTCAATAATATCTCGGAGCTATTGAATACAGAAGCAGCTGATATACTGCTTGACAAGCTCAAAGTCTTCACGGGTGGATCTGGTCTGATCAACATATTATTGCAATCAAATTATACTGGTGTGAGTGGAAGCTTTCAGTTTAGTCCAGACAGGAATATTGTTGGTGGTGGCTATGAAATTATCAATATCAACCAGACCGAAATTACGAGGGTTGGATATTGGTCTAATGATTCTGGATTTTCAGTGGCACCACCTGAAACTCTTAAGAAGAAAGGTCATGGCAGGGTTCCCCAAGATCAGAAGCTTAACAAGATCACTTGGCCAGGTGTAATGACAGGAAGACCACGTGGCTGGGTGATTGCTGATCATGCAAGGCCACTGAGAATTGGAGTTCCCAAGAGAGCTAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAGATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGATGTTCCTTATGTATTTATGCCTTTCGGGAATGGTCAGTCAAATCCCAATTATGACGCGCTTGTGAATATGGTTGCTGACAATGTATTTGATGCGGTTGTTGGAGACATAGCAATTGTGACAAACCGTACACGTGTTGTGGATTTTTCTCAGCCTTTCACATCAACTGGTCTTGTTATAGTGGCTTCAATCAAGCATTCAAAATCAAGTGCTTGGGTATTTCTCAAACCGTTTACGCCAGATCTGTGGTGTGTCACTGCAGCTTCATTTATAATGATTGGGGTAGTTGTATGGATTCTTGAGCACCGAATCAATGACGATTTCCGCGGCCCTCCTAAGAGGCAAATTGTGACGATGTGTATGTTCAGCCTCTCAACTCTGTTTAAGACAAATCAGGAAAATACAGTAAGCTCACTGAGTCGAATGGTGATGATAGTATGGCTTTTTCTGCTGATGGTGATCACGGCTAGCTATACAGCAAACCTGACTTCAATTCTTACGGTGGAGCAGCTTTTGTCACCCATCACCGGCATTGATAGCTTGATTGCGACTAACTGGCCTATAGGGTACCAAGTAGGGTCATTTGCTTTCAACTATCTGACACAGAACTTTAATGTACCAAAATCAAGACTTGTTGCTCTGGGTAACCCTGAGGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTCGTGGAGGGGTGGCAGCTATCATTGATGAGCTTCCATACATAGAGTTATTTCTGTCAACACAAACTGATTTTGGCATTGTTGGACAACAATTTACCAAAAGCAGTTGGGGATTTGCATTTCAAAGGGAGTCTCCCCTGGCTTTTGATATGTCTACAGCAATACTGAAACTCAGTGAGAACGGAGAGCTTCAGAGGATACGAGAGCGGTGGTTCTGCAAGATGGGTTGTCCTGGAGAAAGGAAAAGCGACTCAGAGCCTAACCGACTTCACTTGACAAGCTTCTGGGGTCTATACCTCACATGCGGCATTGTCACTCTCGCTTCTTTTCTGGTGTTTCTGCTGCGCACAATTCGCCAATACATCAGATACAAGCAAAGGCAAAAAGATATTCCTTCTGGATCCCGTGAGGCATCTAGTGGTAAATGTTCCCACGTTATCTATAGCTTTTTAAATTTCATTGATGAGAAGGAAGAAGCCATCAAGAAAATGTTCACTCACTGTGAGAATCCAGAACAGCACCCCACCTGA 2739 0.4323 MKDFMAVTRIIWIWMILCGLARCQRPVSVNIGAVFTFDSVIGKVAKVAMKMAVDDVNTDPLVLNGTKLNLIMEDASCNVFLGSIGAFRALEQGVAAIIGPQSSSIAHAISQITDGLQVPQVSYAATDPTLSSLQFPFFFRSIPSDSEQMAAVADLIQFYGWKEVIAVYLDDDYGRNGISSLDDELEKRSIRMSHKLPVSINFDLNEITNLLNHSKVFGPRVYVVHVNPDPRLRIFNIAYKLKMMSSDFVWLATDSLSATLDSFTPQNHSSLSVVQGVVALRPHIPDSPQKRSFVSQWTKMQNESTASIGLNHYGFFAYDTIWTVAHSIDKFIEIHKNITFSVNNISELLNTEAADILLDKLKVFTGGSGLINILLQSNYTGVSGSFQFSPDRNIVGGGYEIININQTEITRVGYWSNDSGFSVAPPETLKKKGHGRVPQDQKLNKITWPGVMTGRPRGWVIADHARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYDVPYVFMPFGNGQSNPNYDALVNMVADNVFDAVVGDIAIVTNRTRVVDFSQPFTSTGLVIVASIKHSKSSAWVFLKPFTPDLWCVTAASFIMIGVVVWILEHRINDDFRGPPKRQIVTMCMFSLSTLFKTNQENTVSSLSRMVMIVWLFLLMVITASYTANLTSILTVEQLLSPITGIDSLIATNWPIGYQVGSFAFNYLTQNFNVPKSRLVALGNPEEYARALQLGPSRGGVAAIIDELPYIELFLSTQTDFGIVGQQFTKSSWGFAFQRESPLAFDMSTAILKLSENGELQRIRERWFCKMGCPGERKSDSEPNRLHLTSFWGLYLTCGIVTLASFLVFLLRTIRQYIRYKQRQKDIPSGSREASSGKCSHVIYSFLNFIDEKEEAIKKMFTHCENPEQHPT 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0410 912 Pfam Bacterial extracellular solute-binding proteins, family 3 469 808 IPR001638 -
Alju02g0410 912 CDD GluR_Plant 466 808 - -
Alju02g0410 912 Gene3D - 47 396 - -
Alju02g0410 912 Gene3D - 579 713 - -
Alju02g0410 912 FunFam Glutamate receptor 705 812 - -
Alju02g0410 912 FunFam Glutamate receptor 463 579 - -
Alju02g0410 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Alju02g0410 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Alju02g0410 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Alju02g0410 912 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Alju02g0410 912 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 869 IPR015683 -
Alju02g0410 912 FunFam Glutamate receptor 579 716 - -
Alju02g0410 912 SUPERFAMILY Periplasmic binding protein-like II 446 808 - -
Alju02g0410 912 Gene3D - 756 815 - -
Alju02g0410 912 SUPERFAMILY Periplasmic binding protein-like I 22 450 IPR028082 -
Alju02g0410 912 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Alju02g0410 912 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Alju02g0410 912 Gene3D - 144 421 - -
Alju02g0410 912 Gene3D - 460 578 - -
Alju02g0410 912 Pfam Receptor family ligand binding region 47 406 IPR001828 -
Alju02g0410 912 FunFam Glutamate receptor 144 310 - -
Alju02g0410 912 PIRSF IGluLR_plant 1 911 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0410 Alju-ChrAlju02 3082794 3086886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0410 5 912 Ion Channels AT2G32400 55.641 0.0 1029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0576 10 4746238 4752277 Alju02g0410 02 3082794 3086886 CCT
Alju02g0410 02 3082794 3086886 Alju02g0410 02 3082794 3086886 ECH