Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0391 ATGAACTGGAGCAGAGGCAGCATCTTAGGCCATGGCTCATCGGCCACCGTCTCCCTGGCTGCCTCTCCCCAGTGTGGCGAAGCCTTCTTCGCCGTCAAGTCATCGGAGCTTTCTTGCTCAGGATTGTTACAGAGAGAGCAGAGAATTCTCTCTTCTTTGTCTTCTCCTTATATAGTTAGCTATAAAGGGTTTGACATCACAAGGGAGAACAACAAGGTCTTGTACAATCTTTTCATGGAGTATATGCCTCTTGGCACGCTTAGTCAGGCAACTCGCCGGCAGTGTGGCCACCTCGACGAGCCGATGATTGCGTACTACATTCGGCAAGTTTTGCAGGGGCTGGAGTATATACATTCAAATGGGTTCGTACATTGTGACATTAAGGGTGCCAATATCTTGATTGGAGAATATGGAGCCAAAATTGCAGACTTTGGATGTGCTAAGCGAGCGGTGGCGGCGGCGCCGATAAGTGGGACGCCGATGTTTATGGCGCCGGAGGTGGCTCGTGGGGAAGAACAGGGGTATCCCTGTGACATATGGGCACTTGGGTGCACTGTGATTGAAGTGGCTTCAGGGCTTTCACCATGGCCTAATGCAGGAGACCCTGTTTCGATTCTTTACCGGATAGCATATTCCGGCGAGGTGCCGGAGATTCCGGGTTTTCTATCAGAGGAAGCCAAGGATTTCCTGGGGAAGTGCTTAAGGAGGAATCCAAAAGAGAGATGGACGGCAAGTCAACTACTGAAGCATCCATTTCTTGGGGAATTGAATTCCAATTCCAAGCAAATCCACGAATCTAATTCAAGTTCGCCAACAAGTATTCTGGAGCAAGGCTTTTGGAGTTCAATGGAAGAATCAGAGAGTGTAAGCAATCTAGTACATAGTCATGCAAGTTTCGAAAATTCGCCAGCCGTTAGAATCAGACAATTAGCTGTGAGTTCAGGGGAACCCAATTGGATAGAAGATGAAAATTGGATCACAACGATGGGGAATGAAGGATCAGTAATTGAAGCATCAACGAGCAATAATTTGGAAGATTCAGAGACAAGCAATGTTAGTAGTAGAATTAGTGATTGTTTTTGGGATGATTACCAAGGTAGGGATGTTAGTATTGTAACAAGTAGTATCATTTTTGAGAGAGGCATTGATAAGTTGCCACTCCATCCATGTCCCTCACCTTCCTCTGTTGGTGGCTCTGCTCGTCTGTTTTTTAATTTCCTTTGTGAGGACTCAATCTATCTGCTGTCTATGGTAGATTGCTCAGAAGACACAACTATGCTGTCTTGTCTGGCCTCTTTTAAGCACGACCACACAAAAGATCTCAAGTTTATATTTGAATTCGCCCTTATTGGTAATTCTGAAAACGTCTATATACTACAATATCATCGGTATGGGTAG 1398 0.4564 MNWSRGSILGHGSSATVSLAASPQCGEAFFAVKSSELSCSGLLQREQRILSSLSSPYIVSYKGFDITRENNKVLYNLFMEYMPLGTLSQATRRQCGHLDEPMIAYYIRQVLQGLEYIHSNGFVHCDIKGANILIGEYGAKIADFGCAKRAVAAAPISGTPMFMAPEVARGEEQGYPCDIWALGCTVIEVASGLSPWPNAGDPVSILYRIAYSGEVPEIPGFLSEEAKDFLGKCLRRNPKERWTASQLLKHPFLGELNSNSKQIHESNSSSPTSILEQGFWSSMEESESVSNLVHSHASFENSPAVRIRQLAVSSGEPNWIEDENWITTMGNEGSVIEASTSNNLEDSETSNVSSRISDCFWDDYQGRDVSIVTSSIIFERGIDKLPLHPCPSPSSVGGSARLFFNFLCEDSIYLLSMVDCSEDTTMLSCLASFKHDHTKDLKFIFEFALIGNSENVYILQYHRYG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0391 465 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0391 465 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0391 465 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
Alju02g0391 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Alju02g0391 465 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 298 - -
Alju02g0391 465 CDD STKc_MAPKKK 2 253 - -
Alju02g0391 465 SUPERFAMILY Protein kinase-like (PK-like) 3 295 IPR011009 -
Alju02g0391 465 Gene3D Transferase(Phosphotransferase) domain 1 2 313 - -
Alju02g0391 465 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0391 465 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0391 Alju-ChrAlju02 2941188 2943513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0391 2 330 MAP Kinase Kinase Kinase AT5G55090 51.453 3.23e-112 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju02g0391 Pkinase 1.2e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0391 02 2941188 2943513 Alju10g0558 10 4540829 4542031 CCT
Alju02g0391 02 2941188 2943513 Alju02g0391 02 2941188 2943513 ECH