Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0390 ATGAATATGGTGCAGAAGCAGAACAACAATGGTGAAGAAGATATATTTGACGAGAAATTAGGAAGAAAGAAACAAATCAAATTAGGAGCATCATGGTCATCAGCATCAGTACCTAGACAATTTTTGGATCTTGGACTTGCCACTAATGTTAATGTTGATAAATCTTGTCTTTCTAACTCAATGGGAAGAGCACAACAAGTGGCTTCCAAAGATTTTGACTCCAGAAGGAATCAAATCAGCGAAGCGAGACTTGTGCTTGAACCAGAAAAGAAACAACTTGGTGAGCCTATTATTAGAAGAGACGATAGCCCACCAGCTCTTCAAGCTTTCTCCACTAATAAGATCTCAAAAATCAGTACTCCTGAAAGTATTGATCAAGCAGAGACTACAATCAGAAAGGCTAGAGTTTCTGTTCGAACTCGATCGGAAGCCGCCATGGTAGATTACACTGAATTCGATCTCCTCCTTTCATATTTTTCATTGAAAAACAATAATTTAGCTAACCCAATATTATCAATTACTGTCATTCAGATTAGCGATGGATATCAATGGCGAAAATATGGACAAAAGATGGCTAAAGGAAATCCATGCCCCCGTGCTTATTATCGATGCTCCATGGCGGCAAGTTGTCCAGTGCAAAGATGTGCTGGGGACAGAACAATCTTGAACACAACCTACGAAGGGAATCATAACCATCCTTTGCCTCCAGCAGCGATGGCAATGGCACAAACAACTTCATCTGCTGCAAAAATGTTGTTGTCAGGATCATCCTCAAGTGTTGATGGATTAATGAATCCAAATTTTCTCGCAAGGACTTTGCTTCCTTTCTCCTCTGGCATGGCTACTATCTCAGCCTCAGCTCCTTTTCCCACTGTTACACTGGACCTAACCCAGAACCCTAATCCCTTACACTTCTTGCAGAGACCTCCGACGCAGTTTCAGATTCCACTTGCAACTCACGACTTGATCAATTCTCCTACTTCAGGACAGCTTCCTCACATATTTTGTCAGGGGCCTTACAATCAGTCCGAATTTTCGGGGCTTCACATGTCTCAGGATCATGGCGCTTCCCAATCGTCTCAGCCGCTGCCGCAGCTGGCTGACTCCGTGAGTGCCACCACCGGTGCCCCCAACTTTACTGCAGCTCTGGCGGCAGCTATCACTTCCATAATCGGTGGTGGTGCTCAACAAAACAATAGTGGTAATCTCGCGGCTAATCATAGCAATGTCAGTATTACAATTGGTAACAACGATAGTTCTGACTGA 1266 0.4352 MNMVQKQNNNGEEDIFDEKLGRKKQIKLGASWSSASVPRQFLDLGLATNVNVDKSCLSNSMGRAQQVASKDFDSRRNQISEARLVLEPEKKQLGEPIIRRDDSPPALQAFSTNKISKISTPESIDQAETTIRKARVSVRTRSEAAMVDYTEFDLLLSYFSLKNNNLANPILSITVIQISDGYQWRKYGQKMAKGNPCPRAYYRCSMAASCPVQRCAGDRTILNTTYEGNHNHPLPPAAMAMAQTTSSAAKMLLSGSSSSVDGLMNPNFLARTLLPFSSGMATISASAPFPTVTLDLTQNPNPLHFLQRPPTQFQIPLATHDLINSPTSGQLPHIFCQGPYNQSEFSGLHMSQDHGASQSSQPLPQLADSVSATTGAPNFTAALAAAITSIIGGGAQQNNSGNLAANHSNVSITIGNNDSSD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0390 421 Gene3D WRKY domain 171 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju02g0390 421 Pfam WRKY DNA -binding domain 180 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju02g0390 421 SUPERFAMILY WRKY DNA-binding domain 174 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju02g0390 421 ProSiteProfiles WRKY domain profile. 173 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju02g0390 421 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 401 IPR044810 GO:0003700
Alju02g0390 421 MobiDBLite consensus disorder prediction 346 371 - -
Alju02g0390 421 SMART WRKY_cls 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0390 Alju-ChrAlju02 2934138 2935497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0390 37 402 WRKY Transcription Factor Family AT1G62300 47.583 1.79e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju02g0390 WRKY 1.2e-18 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0390 02 2934138 2935497 Alju10g0555 10 4514505 4516413 CCT
Alju02g0390 02 2934138 2935497 Alju02g0390 02 2934138 2935497 ECH