Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0382 ATGGAGGGCTCGGGGTCGGAAGAGAATAATTCTGAAGTGCATTTGACTTCCGCTGCAGCCTTTGTGGAGGGTGGAATCCAGGACGCTTGTGATGATACTTGTAGCATATGTCTTGAAGCATTTCATGAAAGCGATCCGTCAACAGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAAAGAAGCCCTCAATGCCCCATGTGTTGGCAACCCATCAGTTTCAAAGATCCATCGAGTCAGGAATTACTTGAAGCTGTGGAAAAAGAGAGAAACATTAGGTTGAATCCACCTAGAAATGCCACAATATTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAACATTTGCCTGTTGGTGCTAATGATGCTGATCTTGAAGAGCGTATCATACAGCACTTAGCCGCTGCTGCAATGGGACGTGCACGCCATATTGCTAGAAGGGAAGGTCAGAGAAGCAGGTCATCAGCTCAAGGTCGCCCACATTTTTTGGTATTTTCAACCCATCCTAATTCACCTCCCATGGCTCCTGCCTCTCCAACTCATGGGGCAGACGGTGAACCAGCTTCAGCAATCACTGTTGCTACACTATCTCAAACTCCTGCCACTGGGGAAGAATCATCACAGTCAACTTCTGTTCCTCTTGTTCAAGCAGACCATATTTCTGCTCCAGGATCAGGATCTACTGTTCTTGCTGCTGATAACCATGGATCATCTTACAACAATAGGAGATCTCCTAGCCAGTCTTCTCCAAGCAGTCAGGACAGAGCAGGGCCATCAGAATTTCAATCATTTTCAGAATCTTTGAAGTCCAGATTTAATGCAGTTTCAACTAGATACAAAGAGTCGATATCCAGGAGCACCAGAGGTTGGAAGGAGAGATGGTTCTCTCGCAACAGCTCTATGTCTGATGTGGGATCCGAAGGTAGACAGGAGGTTAATGCAGGCATTGCAACTGTGTCACGTATGATGGAACGACTTGATACCAGAGACAACAATAGAAGTGATAGCAATCCTTCTCAAAGTCATTTAGAAGGTGGTTCGGTTACTGGATCAAATGACCAACACATTTCAGATGCCCAAGGTGAAGGTGCATCAAGAGATTATGACACAAAAACATCCTTTGCAGCAGCTTTGCTTTGGCTGAAAGGTAGAAATAGGATTGCCCATTGCTGGACGTGA 1197 0.4536 MEGSGSEENNSEVHLTSAAAFVEGGIQDACDDTCSICLEAFHESDPSTVTSCKHEFHLQCILEWCQRSPQCPMCWQPISFKDPSSQELLEAVEKERNIRLNPPRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAMGRARHIARREGQRSRSSAQGRPHFLVFSTHPNSPPMAPASPTHGADGEPASAITVATLSQTPATGEESSQSTSVPLVQADHISAPGSGSTVLAADNHGSSYNNRRSPSQSSPSSQDRAGPSEFQSFSESLKSRFNAVSTRYKESISRSTRGWKERWFSRNSSMSDVGSEGRQEVNAGIATVSRMMERLDTRDNNRSDSNPSQSHLEGGSVTGSNDQHISDAQGEGASRDYDTKTSFAAALLWLKGRNRIAHCWT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0382 398 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
Alju02g0382 398 SMART ring_2 34 74 IPR001841 -
Alju02g0382 398 MobiDBLite consensus disorder prediction 339 365 - -
Alju02g0382 398 SUPERFAMILY RING/U-box 27 81 - -
Alju02g0382 398 MobiDBLite consensus disorder prediction 335 373 - -
Alju02g0382 398 MobiDBLite consensus disorder prediction 147 193 - -
Alju02g0382 398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 83 IPR013083 -
Alju02g0382 398 Pfam Ring finger domain 32 74 IPR001841 -
Alju02g0382 398 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 18 83 - -
Alju02g0382 398 MobiDBLite consensus disorder prediction 224 273 - -
Alju02g0382 398 FunFam E3 ubiquitin-protein ligase RHF2A 5 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0382 Alju-ChrAlju02 2875376 2879480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0382 31 82 C3H Transcription Factor Family AT4G00335 46.154 3.57e-12 63.2