Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0379 ATGTCAATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCATGCGGCAGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACGTGGCAGCATCTCCCCAAACATTCCCTCCTCAAGAGCTTCAGTTACAGAAACAGCAACTAAGTTATGAAGAATCAAGCAACAGAGAAGCGGGATCATCTTCAAAATGCAGTAAATTTGCTGCATTTGAGTCAGAAGAACATGAACAACACAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCCGCTTATAACAGGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAGGCGTTTAGCACAGCGGCCAAAAATTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGCACTCAAAAATCTAATAATGGCCTTTATTGA 543 0.4438 MSMDMMATERVCYVHCNFCNTILAVSVPCGSFLTIVTVRCGHCANLLSVNVAASPQTFPPQELQLQKQQLSYEESSNREAGSSSKCSKFAAFESEEHEQHRIPPIRPPEKRQRVPSAYNREEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQEEGTQKSNNGLY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0379 180 MobiDBLite consensus disorder prediction 71 116 - -
Alju02g0379 180 PANTHER PROTEIN YABBY 6-RELATED 1 166 IPR006780 GO:0007275
Alju02g0379 180 MobiDBLite consensus disorder prediction 90 116 - -
Alju02g0379 180 Pfam YABBY protein 7 156 IPR006780 GO:0007275
Alju02g0379 180 MobiDBLite consensus disorder prediction 71 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0379 Alju-ChrAlju02 2853116 2858654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0379 1 180 C2C2-YABBY Transcription Factor Family AT1G08465 62.366 4.07e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju02g0379 YABBY 3.6e-65 CL0114