Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0375 ATGTTTCGGAGGGCCCCCAAAAGAAGTGACAACACTAAGTACTATGAGATTCTGGGCGTCTCTAAGGACGCATCCCAGGATGATTTGAAGAAGGCTTACAGAAAAGCCGCCATAAAGAACCACCCCGACAAGGGCGGTGATCCCGAGAAGTTCAAAGAGCTGGCACAAGCTTATGATGTTCTGAGTGACCCTGAGAAACGTGAAATATATGATCAATATGGTGAAGATGCACTCAAGGAAGGAATGGGAGGCGGAGGCGGAGTTCATGATCCGTTTGACATCTTCCAGTCTTTCTTTGGCGGGAGTCCTTTTGGAGGTGGTGGCAGTAGAGGACGAAGGCAGAGAAGGGGAGAAGATGTTGTTCACCCCCTCAAGGTCTCTTTGGAGGACCTTTACCTTGGGACTTCTAAGAAGCTTTCCCTGTCACGAAATGTCTTGTGTTCAAAGTGCAATGGGAAAGGTTCAAGATCTGGTGCTTCAATGAAGTGTGCGGGTTGTCAAGGCACTGGTATGAAGGTTTCTATTAGGCATCTCGGCCCCTCTATGATGCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACTGGAGAAACTATCAATGATAAGGACCGTTGCCCACAGTGCAAAGGGGAGAAGGTTGTTCAAGAGAAGAAAGTACTGGAAGCTATAGTGGAGAAGGGGATGCAGAATGGACAGAAAATTACTTTCCCTGGTGAAGCGGATGAGGCGCCAGATACGATAACAGGGGACATAGTGTTTGTCCTTCAGCAGAAGGAACACCCCAAGTTTAGGAGGAAGGGTGGGGATCTTTTTGTGGAGCACACTTTGTCCCTTACGGAGGCTTTATGTGGCTTTCAATTTGTGCTGACTCACCTGGATGGCAGGCAGCTCCTCATCAAATCAAACCAAGGGGAAGTTGTCAAGCCTGATTCATACAAGGCAATTAATGACGAAGGAATGCCGATGTACCAGAGGCCATTCATGAAGGGAAATCTGTACATTCACTTTACTGTAGACTTCCCAGATTCTGTGAGTCCCGACCAAGTTAAAGAATTGGAGGGTGTTCTGCCGCCTAGGCCTTCACCACAGTTGACGGACATGGAGCTGGATGAATGTGAGGAGACTACACTTCATGATGTCAATATTGAGGAGGAAATGAGGAGGAAGCAACAGGCACAGCAGGAGGCATATGATGAGGATGAGGATATGCCTGGTGGCGCTCAGAGAGTGCAATGCGCCCAGCAGTGA 1251 0.4836 MFRRAPKRSDNTKYYEILGVSKDASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGVHDPFDIFQSFFGGSPFGGGGSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSRSGASMKCAGCQGTGMKVSIRHLGPSMMQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEAIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFRRKGGDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNQGEVVKPDSYKAINDEGMPMYQRPFMKGNLYIHFTVDFPDSVSPDQVKELEGVLPPRPSPQLTDMELDECEETTLHDVNIEEEMRRKQQAQQEAYDEDEDMPGGAQRVQCAQQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0375 416 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Alju02g0375 416 CDD DnaJ 14 63 IPR001623 -
Alju02g0375 416 Gene3D - 111 259 - -
Alju02g0375 416 FunFam DnaJ subfamily A member 2 147 213 - -
Alju02g0375 416 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
Alju02g0375 416 Coils Coil 383 403 - -
Alju02g0375 416 PRINTS DnaJ domain signature 15 33 IPR001623 -
Alju02g0375 416 PRINTS DnaJ domain signature 66 85 IPR001623 -
Alju02g0375 416 PRINTS DnaJ domain signature 46 66 IPR001623 -
Alju02g0375 416 Pfam DnaJ C terminal domain 121 342 IPR002939 -
Alju02g0375 416 FunFam dnaJ protein homolog 10 109 - -
Alju02g0375 416 Gene3D - 261 343 - -
Alju02g0375 416 Pfam DnaJ domain 13 71 IPR001623 -
Alju02g0375 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 118 262 IPR008971 GO:0006457|GO:0051082
Alju02g0375 416 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Alju02g0375 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 351 IPR008971 GO:0006457|GO:0051082
Alju02g0375 416 CDD DnaJ_C 118 344 - -
Alju02g0375 416 Gene3D - 147 213 - -
Alju02g0375 416 FunFam Chaperone protein dnaJ 3 214 254 - -
Alju02g0375 416 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Alju02g0375 416 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Alju02g0375 416 SMART dnaj_3 12 66 IPR001623 -
Alju02g0375 416 MobiDBLite consensus disorder prediction 378 416 - -
Alju02g0375 416 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Alju02g0375 416 Hamap Chaperone protein DnaJ [dnaJ]. 10 381 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju02g0375 416 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 397 IPR044713 GO:0006457|GO:0030544
Alju02g0375 416 Gene3D DnaJ domain 10 110 IPR036869 -
Alju02g0375 416 FunFam DnaJ subfamily A member 2 261 343 - -
Alju02g0375 416 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Alju02g0375 416 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0375 Alju-ChrAlju02 2830492 2832619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0375 5 73 C2H2 Transcription Factor Family AT1G74250 41.026 2.35e-11 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0375 02 2830492 2832619 Alju10g0528 10 4316705 4319014 CCT
Alju02g0375 02 2830492 2832619 Alju02g0375 02 2830492 2832619 ECH