Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0366 ATGGAAGAAATTGACGTTCCTTCTCATTTTCTCTGCCCCATTTCCCTCCAGCTCATGAGGGACCCCGTCACGGTACGCACCGGAATCACCTACGATCGAGAGAACATTGAAACGTGGCTGTTTTCGTGCAAGAACAGAACATGCCCTGTCACGAAGCAATGCATTTTAGATACAGATCTCACCCCAAACCACACGCTTCGACGTCTCATCCAGGCTTGGTGCACCCTGAATGCATCCTTTGGGATCGAGCGTATTCCCACTCCCAAGCCACCCCTGGACAAAATCCAGATTGCCAAACTCCTCTCCGAAGCAAACCAATCCCCACACAACCATCTCAAATGCCTCACAAGGCTCCGATCCATTGCTTTCGAAAGCGACAGGAACAAGATTTATTTGGAATCTGCAGGGGCCATAGAGTTCTTGGCCTCAGCCTTAAAGTTAAGCAGTGGCAGAGACGCCAAAGTCAACCACGACGACGAATGTATTACCGTTATGGGCTGTGAAGAAGCAGCGCTTGAGGTTCTGTACCATCTAAAACCTTCAGAGTCTCACATTAAGAGTCTAATCAGAAACGAGGAAATTAAATTCATCGAGTCCTTGATCCAAATCCTGAGGACCGGGAACTACCAATCCCGAGCCTATGCGACAATATTACTAAAATCAGCTTTCGGAGTGGCAGATCCAAGCCAATTGATCAATGTGAGAACAGAATTGTTGGCGGAACTCACGAGAGTGTTGCGAGACAAGATTTCACAACAAGCGACAAAGGCGGCGTTGAAGCTGGTGGTGGAGCTTTGTCCATGGGGGAAGAACAGAATCAAAGCCGCGGAAGGCGGCGTGGCAGTGGTGCTGATAGAGATGCTTCTAGAAGCATGGGAGAGAAGAGTGTGTGAACTGATTCTGATAGCGTTGGATCAACTGTGTGGGTGCGCAGAAGGAAGAGCGGAGGTAGTGAAGCACAGCGCAGGAGTGGCGATAGTGTCGAAGAAGATTCTGAGGGTATCACACGTGGCAACGGACAGAGGGGTGAAGATATTGAGCTCAATATGTAGGTATTCGGGGAATGCGAGGGTAATTCAGGAAATGTTGCAGGTGGAGGCGAGCTTGAAGACCAAGGAGAGGGCCAGGGAGGTTCTCAAATTGCACTCCAACGTTTGGAGTATTTCCCCCTGTATCCCCCCTCCTCTCCTCCAATCCTATCCTTCCTCTGATTGA 1215 0.4971 MEEIDVPSHFLCPISLQLMRDPVTVRTGITYDRENIETWLFSCKNRTCPVTKQCILDTDLTPNHTLRRLIQAWCTLNASFGIERIPTPKPPLDKIQIAKLLSEANQSPHNHLKCLTRLRSIAFESDRNKIYLESAGAIEFLASALKLSSGRDAKVNHDDECITVMGCEEAALEVLYHLKPSESHIKSLIRNEEIKFIESLIQILRTGNYQSRAYATILLKSAFGVADPSQLINVRTELLAELTRVLRDKISQQATKAALKLVVELCPWGKNRIKAAEGGVAVVLIEMLLEAWERRVCELILIALDQLCGCAEGRAEVVKHSAGVAIVSKKILRVSHVATDRGVKILSSICRYSGNARVIQEMLQVEASLKTKERAREVLKLHSNVWSISPCIPPPLLQSYPSSD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0366 404 FunFam RING-type E3 ubiquitin transferase 1 83 - -
Alju02g0366 404 SUPERFAMILY ARM repeat 106 361 IPR016024 -
Alju02g0366 404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Alju02g0366 404 CDD RING-Ubox_PUB 7 60 IPR045210 -
Alju02g0366 404 SUPERFAMILY RING/U-box 3 77 - -
Alju02g0366 404 PANTHER WDSAM1 PROTEIN 2 393 IPR045185 GO:0061630
Alju02g0366 404 Gene3D - 96 388 IPR011989 -
Alju02g0366 404 Pfam U-box domain 6 75 IPR003613 GO:0004842|GO:0016567
Alju02g0366 404 ProSiteProfiles U-box domain profile. 5 80 IPR003613 GO:0004842|GO:0016567
Alju02g0366 404 SMART Ubox_2 9 73 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0366 Alju-ChrAlju02 2752392 2754770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0366 2 402 U-box Gene Family AT3G52450 49.423 9.88e-138 399