Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0365 ATGGCAGAAAGTGAAGTTCCTCAATATTTCGTGTGTCCTATTTCTCTTGAGATCATGAAAGATCCTGTGACGACCGTAACAGGTATAACCTACGACAGAGACAGCATCGAGCAGTGGTTGCTCACGGCAACGGAGAGGAAATGCCCTGTCACCAAGCAGCCATTGCCTCCTAACTCAGCCTTGACCCCAAACTCTAACGTACTCAGGCTAATCCAGGCCTGGTCCTCACAAAATAATGTTCAAAACGGCGTCGTTCGGGTCCCAACCCCGAAATCCCTCCTCACCTCCATCCACGTTCACAAGCTTATTTCTGATCTTCAGAATCCTCATCTGTACCAAACGACAATGATAAAAATGGATGCTTTGGCCACACACAGCGAAATCAACAGAAGGTGCATGGTGGAATCTGGAGTACTCGAGCCTATGGCTTCCATAATTACTGAGAGTTTCAAAGAAGGTATAACAAATTGCCTTGAAGAAGCTTTGAGAATTTTTCGTTCACTCTGGGCTACATCGTCATCCATGCCTCACATGAAGCCTCTGTTCTGTGAAAACTTAGTATTTATCATCACCTCTTTGACCTGGGCTTTGCAAATTGACGTCACCAACGGCGTTAACATAATAAACAAAACAATGCCTTTTCTGAAGTCGACTATTGAAGCCGCAGATTCAAGCCTTCTGGGAAACTTAAAGGTTGAATTTTTCAGGGAAATAACAAGGGTGCTGAAAAACAGAACAGTCTCAGAGCAGGCCATAAAATCATCCTTGCAGGTTCTCATAGAAACGTGCCCATCAGGAGGAAACCGAATGAAAATCGTAGAATCAGGAGCAGTCTTTGAATTAATTAATCTTGAGCTCGAAAAACCAACAAAGAAGATAACAGAGCTGGTGTTCAACCTTCTGACGCATCTATGTTCGTGTGCTGATGGGAGAGAACAGTTTCTGCAACACGCAGCGGGAATCGCTGTGATATCTAAGAGGATTCTGAGGGTTTCGAATGCAACAGACGATCGAGCTCTTCATATATTATCGTTGATAGCTAGGTACTCGTCTTCGAACGATGTCGTTTTGGAGATGTTGAGGGTGGGAGCTGTGTCCAAGCTTTGCATGGTGATGCAAGCTGACTGTGCTTCGTATTTGAAGGAGAAAGCAAGAAGTATCCTTAAGTTACACTCCAAAACTTGGAACAATTCTCCTTGCATTCAGGTATATTTGTTAACCAGGCACCAAAGGTGA 1236 0.4417 MAESEVPQYFVCPISLEIMKDPVTTVTGITYDRDSIEQWLLTATERKCPVTKQPLPPNSALTPNSNVLRLIQAWSSQNNVQNGVVRVPTPKSLLTSIHVHKLISDLQNPHLYQTTMIKMDALATHSEINRRCMVESGVLEPMASIITESFKEGITNCLEEALRIFRSLWATSSSMPHMKPLFCENLVFIITSLTWALQIDVTNGVNIINKTMPFLKSTIEAADSSLLGNLKVEFFREITRVLKNRTVSEQAIKSSLQVLIETCPSGGNRMKIVESGAVFELINLELEKPTKKITELVFNLLTHLCSCADGREQFLQHAAGIAVISKRILRVSNATDDRALHILSLIARYSSSNDVVLEMLRVGAVSKLCMVMQADCASYLKEKARSILKLHSKTWNNSPCIQVYLLTRHQR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0365 411 PANTHER WDSAM1 PROTEIN 4 402 IPR045185 GO:0061630
Alju02g0365 411 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Alju02g0365 411 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Alju02g0365 411 CDD RING-Ubox_PUB 7 55 IPR045210 -
Alju02g0365 411 SUPERFAMILY ARM repeat 104 387 IPR016024 -
Alju02g0365 411 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Alju02g0365 411 SUPERFAMILY RING/U-box 4 80 - -
Alju02g0365 411 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
Alju02g0365 411 Gene3D - 98 402 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0365 Alju-ChrAlju02 2745280 2746515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0365 3 401 U-box Gene Family AT2G35930 38.462 1.09e-89 275