Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0364 ATGGGGACGTTCTTTCATGGAGGCAACCCAGAAATCCAATCCTCCGGAGCCGCTGCTTCTGGCGATGGCTTCCAGACACTTTACCTTCTGAACCCCAGCCCCACCACCCCCTACGTTCCCTACTCCGATACAAGCCCCCACCCTCAACCCTCACCCAACACGCTTCTTCTCAATCCCAACAACTCTCCCCCCAACGCCCTCAACCTCGCCACCTTCTCCAACCATAACCCCGACGATCCCTCCCGTCCCTCCTTCCTCGCACACGATATCTCCGCCTTCCACGGCTTCACCGCCGCCGCTCCTCCGCGTGTTCACCACAACCTCTGGGGTTCAATGATTGATCCTCACCCAACATCTAGCAGTTCTGGTGGGGCTCCCTCCGCCTCCCTCGACGTGTCGCCCCATATGAGTTTCAGGAGGCCTACTCATCAGCAAGGTCTGTCGCTGACCCTCTCATCTCAGCAGACACCTTATAGGTCGCTTTCCGGCGAGCTTCACGTTCCTGGACAACCTCAAGCTGCTGCTATACCAACCTCCAGCTGCGATGATGTGCGGATTCTGGTTCCAAGTAATCATGCCTCGTCGAATGGAATTTCCAGTGTGCAGAGTTTTGTTTTAGGATCAAAGTACTTGAGAGCAGCTCAGGAGGTTTTGGAAGAAGTTGTTAATGTGGGCAAGGGAATAATCAACCAAGAGGGGGCTATGAAAGAGAAAATGAAAGCCAATAAAGAATCGACATGTGGTGGGAATCATGACGGTTCAAGTGGCGGTGATGGAGGCGGACGAGAAAATAGTGGAAATGGGAAGCAAGGGGGTGAACTCAGTACAGCACAGAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTAACCGTACTTGATGAGGTGGAACAAAGGTACAGACAGTATCACCACCAAATGCAGATAGTGATATCATCATTTGAGCAAGCCGCGGGGTATGGTGCGGCCAAAACATACACATCCCTTGCCCTAAAGACCATCTCTAAGCAATTTCGATGTCTCAAAGATGCAATCGCCTCACAAATAAGAGCGACAAGCAAAAGTTTGGGCGAAGAAGATTGCTTGGGAGCTAAGTTAGAAGGTTCCAGGCTGAGGTTTGTGGACCATCATCTTCGCCAACAACGCGCTTTACAGCAACTGGGAATGATACAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGAGCCGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTATCCCAAGGACTCTGATAAAGTCATGCTTGCAAAACAAACTGGACTTACTCGCGGCCAGGTGTCAAACTGGTTCATAAATGCGAGAGTTCGGCTATGGAAACCAATGGTGGAAGAAATGTACATGGAAGAAATGAAGGAGCAAGAGGGGAATAATAATAATAAGGAGGTGGGGTCAAGCACTAAGGATAATTCACAGCCACAAGATCCGGGTGGGCTTCGGCTTGATCATCATCAGATGAAAGGCTTGCAATCAAATCCACATCAAAGCTTCAATAACCAAATATCTACCCCGACCGACATCTCAAACCCCTCATCAATCTATCTTTCAGGATTTCCCGTTGGATCATCGTCTCACCATCATCTTGACATGAGTCCCAAAAGGCCAAGAAGTTCAGAAGTAATGAACAACTCTCCAAGCAGTATCCTGTCGGTGGACATGGAAATGAAGCCCGGAGACACAGACAGATCAGAAGGAAACGCAAAGTCGTTTGGAATGGAAAGGCACAGTTTGATAAGTAATAATAATGGAGAAGGATATGGAGGGTTCACCATACAAGACATGGGAAGGTACAACGTGGCTGACCAATTGGCTCCAAGGTTCCATGGAAACGGCGTGTCGCTCACTCTGGGACTTCCACATAACAATACTGAGAACCTTCCCCGCCATGGATTTCTGTCTCACAATATGAACTTGGATACTGACGGAACCGACTTCTGTGCGATCAACGCTCCGCCGCCGTCTCATTCCAACGGCAGTTATGACAATATTGATCACATTCAGAACAGAAAGAGGTTTGCTGCCCAGTTATTGCCAGATTTTGTGGCCTGA 2091 0.494 MGTFFHGGNPEIQSSGAAASGDGFQTLYLLNPSPTTPYVPYSDTSPHPQPSPNTLLLNPNNSPPNALNLATFSNHNPDDPSRPSFLAHDISAFHGFTAAAPPRVHHNLWGSMIDPHPTSSSSGGAPSASLDVSPHMSFRRPTHQQGLSLTLSSQQTPYRSLSGELHVPGQPQAAAIPTSSCDDVRILVPSNHASSNGISSVQSFVLGSKYLRAAQEVLEEVVNVGKGIINQEGAMKEKMKANKESTCGGNHDGSSGGDGGGRENSGNGKQGGELSTAQRQELQMKKSKLVTVLDEVEQRYRQYHHQMQIVISSFEQAAGYGAAKTYTSLALKTISKQFRCLKDAIASQIRATSKSLGEEDCLGAKLEGSRLRFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYMEEMKEQEGNNNNKEVGSSTKDNSQPQDPGGLRLDHHQMKGLQSNPHQSFNNQISTPTDISNPSSIYLSGFPVGSSSHHHLDMSPKRPRSSEVMNNSPSSILSVDMEMKPGDTDRSEGNAKSFGMERHSLISNNNGEGYGGFTIQDMGRYNVADQLAPRFHGNGVSLTLGLPHNNTENLPRHGFLSHNMNLDTDGTDFCAINAPPPSHSNGSYDNIDHIQNRKRFAAQLLPDFVA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0364 696 Gene3D - 398 477 - -
Alju02g0364 696 SMART prehox3 199 347 IPR006563 -
Alju02g0364 696 MobiDBLite consensus disorder prediction 472 488 - -
Alju02g0364 696 Coils Coil 279 299 - -
Alju02g0364 696 MobiDBLite consensus disorder prediction 48 80 - -
Alju02g0364 696 MobiDBLite consensus disorder prediction 239 274 - -
Alju02g0364 696 SMART HOX_1 395 459 IPR001356 GO:0003677
Alju02g0364 696 Pfam Homeobox KN domain 412 451 IPR008422 GO:0003677|GO:0006355
Alju02g0364 696 MobiDBLite consensus disorder prediction 115 147 - -
Alju02g0364 696 MobiDBLite consensus disorder prediction 465 556 - -
Alju02g0364 696 SUPERFAMILY Homeodomain-like 396 462 IPR009057 -
Alju02g0364 696 MobiDBLite consensus disorder prediction 35 83 - -
Alju02g0364 696 CDD homeodomain 395 455 IPR001356 GO:0003677
Alju02g0364 696 MobiDBLite consensus disorder prediction 502 533 - -
Alju02g0364 696 ProSiteProfiles 'Homeobox' domain profile. 392 455 IPR001356 GO:0003677
Alju02g0364 696 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 134 479 - -
Alju02g0364 696 FunFam BEL1-like homeodomain protein 9 398 460 - -
Alju02g0364 696 Pfam Associated with HOX 205 346 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0364 Alju-ChrAlju02 2738985 2742091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0364 1 696 Homeobox Transcription Factor Family AT2G35940 41.579 2.90e-133 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju02g0364 POX 1.3e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0364 02 2738985 2742091 Alju10g0516 10 4172294 4175886 CCT
Alju02g0364 02 2738985 2742091 Alju02g0364 02 2738985 2742091 ECH