Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0340 ATGGATGCAGCGACAGTAATCTGGGATGCATCGAAGTGCTTATGTGGCAGCACAGCCAAACATGCTGCTTTCATTTGCCGTTTGGAGGACAACCTGGGATCATTGAGGAGCCAACGGACAGAGCTCCAAAGCCTAAGCCAAGATGTTAATGCAAGAATCCGACAAGCTGAGAGTTTCGCTTATATGCGAAGGACCAGAGAAGTCGACGGTTGGCTGCAAAGTGTAAACGCCTTAGAACAGGTAATGGAGGATATTATGCAACAAGCTGAGAATGTTGTCCAGTTCAAGTGTTTTGGTAGCCTATGTCCAAAAAATTGTTTCTCAAGCTACATGACTGGAAAAGAGGTTGTTAAAACACTGGATCGTGTCAGAGAATTGATGGCTAGAGGACACAAATTCGATAATGATGCTAATATTGCTTATCAGTTGCCATGTGAGCCTGTGAATGAGATGCCGGTGGCCAAGACTGTGGGCATGGATTCCATGTTAAACAAGGTATGGGATAGCATTGAAGACGTAAATGTGGGTGTTATTGGTTTGTATGGGATGGGTGGTTCTGGAAAAACAACCCTTATGAGGAAACTCAATAATGAGTTGGCCTACAGAAGTCATGATTTTGTGCTAGTAATATGGGTAGTTGTTTCTAAGGACTTTAATATTGATCAAATTATGGAAGACATCCGACAAAAATGTGGGATTGGTGATATGAAATGGAAGAACAAAAGTAAAGATGAGAAAGCCATAGAAATCTACAGGGTCGTGAAGCAGAAAAAGTTTATTTTGCTGTTAGATGACATATGGGATGAACCAGATTTGCGAGGTATTGGAGTTCCACTGCCAAATGAGGTCAATCAATCAAAGATTTTGTTCACAACACGTCTTGAAAATGTATGTGACCAAATGCAAGCAAAGAAGTTCAAAGTGGAATGTTTGACAGAGAAAGAAGCATTCGATTTGTTTTGCATGAAAGTGGGTGCAGAAACTCTAAATTCACACCCAAGTATCAATGGGTTAGCACAAGAGCTTGTGAGAGAATGCAAAGGATTACCACTTGCACTGATAACAGTAGGACGAGCTATGGCTGGCCGAAAAAGTCCACAGGCGTGGAAACATGCTATAAGGGAACTACAAAGTTTCCCTTCAGGGGTTTGTGGTATGGAGAAAGAAGTATTCAACACTCTCAAGTTCAGCTATGATAGCCTTCCTACTGACATAGACAAGAAGTGTTTCTTATATTGTGCATTGTTCCCGGATGATCGAACAGTTTATGTCCCTCGTCTAATTCGCTTTTGGATCGGGGAAGGATTTCTCAAGGAGCATAGTAGTATACACGATGCCTATGATCATGGGGAAGATATAGTGGAAAGGTTGAAGCTAGCATGTTTATTAGAAGGCGAGGAATTTCTTTGGGTTAAGATGCATGATGTGGTTCGAGACATGGCACTATGGTTAGCTCGTAACCAAGATCAAGAGAAAAACAGAGTTCTAGTGCAAGGTGAAGCACTAGGATCCTCACAAATTGACAATCCTGAAAGATCAATGATGATACAAAGGATTTCAATAATGTATGCAAAAGGAGATGACTGGCATGTTCCAATTTGTCCCAATCTTTTGTCCCTCATTGTGTGGGGCAATGACTGCAAAATAGATTTTGCAAATGTCCAATTCTTAAGCAACTTGAAAGTCTTGAGTCTAAGGATGGAGAGGATCTCGGCAATCCCGGCTGAAATAGGTCAACTAATTCACTTGGAATATCTGGAGATATCTGAATTGCACATTACAGAAAAATTACCGCTTGAGATGAAAAATTTAAAAAGCTTAAGGGTATTCCTCCTAGAATATGTTCAGTTCAGTCTTGAAATCATTCCTTTGGAGGTGATATCAAATCTTGAAGGATTAAGAGTGTTCTCATTCATCGAAAGTAGATTCAAAGAATGGAAACCCTCATTGCAAAAGATAAAGTCCTCATTCCTTGCCACCACTCACTTCACCCATTCTATGGAGAAATCATTTTTGGAGCAGCTAGAGTTACTACCATTTTTGGAGGATCTAAGCATCACCTTGGAGACTGCTACAGGTATCAAGAAATTGCTTAGCTCAACCAAATTGAAACCTTGTGTGAGATTAATGGGACTTTATCAGAACAAGATGGCTGCAAGCACCACAATGTTGGTACCATCTATGACAAGTATGCAACATCTGGAGCGGATGACTTTGGTTGGATTACAAGACAATATGACAGAGTCCTCTGTTAATCATGCATACCCTTTTTGCAAGCTCCGTTGGGTAACAATTTTGGATTGTCATAACATAAGTCATTTGACATGGCTCAAGTATGCTGTAGTCCTTGATTATCTTATTGTAGAAAACTGTAACATAATGGAGGAAGTGATAAAAGAAGCTCAAGAAAACGAAGACAACAGGAATATAGATGACCTATTCTCAAATCTCAGTACATGA 2460 0.4028 MDAATVIWDASKCLCGSTAKHAAFICRLEDNLGSLRSQRTELQSLSQDVNARIRQAESFAYMRRTREVDGWLQSVNALEQVMEDIMQQAENVVQFKCFGSLCPKNCFSSYMTGKEVVKTLDRVRELMARGHKFDNDANIAYQLPCEPVNEMPVAKTVGMDSMLNKVWDSIEDVNVGVIGLYGMGGSGKTTLMRKLNNELAYRSHDFVLVIWVVVSKDFNIDQIMEDIRQKCGIGDMKWKNKSKDEKAIEIYRVVKQKKFILLLDDIWDEPDLRGIGVPLPNEVNQSKILFTTRLENVCDQMQAKKFKVECLTEKEAFDLFCMKVGAETLNSHPSINGLAQELVRECKGLPLALITVGRAMAGRKSPQAWKHAIRELQSFPSGVCGMEKEVFNTLKFSYDSLPTDIDKKCFLYCALFPDDRTVYVPRLIRFWIGEGFLKEHSSIHDAYDHGEDIVERLKLACLLEGEEFLWVKMHDVVRDMALWLARNQDQEKNRVLVQGEALGSSQIDNPERSMMIQRISIMYAKGDDWHVPICPNLLSLIVWGNDCKIDFANVQFLSNLKVLSLRMERISAIPAEIGQLIHLEYLEISELHITEKLPLEMKNLKSLRVFLLEYVQFSLEIIPLEVISNLEGLRVFSFIESRFKEWKPSLQKIKSSFLATTHFTHSMEKSFLEQLELLPFLEDLSITLETATGIKKLLSSTKLKPCVRLMGLYQNKMAASTTMLVPSMTSMQHLERMTLVGLQDNMTESSVNHAYPFCKLRWVTILDCHNISHLTWLKYAVVLDYLIVENCNIMEEVIKEAQENEDNRNIDDLFSNLST 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0340 819 Pfam NB-ARC domain 160 399 IPR002182 GO:0043531
Alju02g0340 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 413 IPR027417 -
Alju02g0340 819 Gene3D - 311 402 IPR042197 -
Alju02g0340 819 Gene3D - 142 310 IPR027417 -
Alju02g0340 819 FunFam Probable disease resistance protein At5g66910 310 397 - -
Alju02g0340 819 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 814 - -
Alju02g0340 819 FunFam Probable disease resistance protein At1g61300 140 306 - -
Alju02g0340 819 SUPERFAMILY L domain-like 472 795 - -
Alju02g0340 819 Gene3D Ribonuclease Inhibitor 520 818 IPR032675 -
Alju02g0340 819 PRINTS Disease resistance protein signature 253 267 - -
Alju02g0340 819 PRINTS Disease resistance protein signature 555 571 - -
Alju02g0340 819 PRINTS Disease resistance protein signature 177 192 - -
Alju02g0340 819 PRINTS Disease resistance protein signature 346 360 - -
Alju02g0340 819 FunFam Probable disease resistance protein At1g63360 398 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0340 Alju-ChrAlju02 2602745 2605489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0340 154 494 WRKY Transcription Factor Family AT5G45050 22.689 4.39e-11 65.1