Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0339 ATGGAAGATCTTCCTCCTCCTGGTTTTCGCTTCTACCCAACGGAGGAAGAGCTGGTGGCTTTCTACCTCCACAACAAGCTTCAAGGTCCAAGTGACCACATCAACAGAGTCATCCCTGACGTTGGCATTTATGATTTTGAGCCCTCCGAGCTTCCCAAGATGGCGGGAGAGATGTGTCGCGGAGACACAGAGCAATGGTTCTTCTTCTCGCCGAGACAAGAGAGAGAAACCAGAGGAGGAAGACCCACCCGAAGCACGGCTTGTGGGTATTGGAAAGCCACGGGTTCTCCAGGCTACGTTTACTCTTCTGATAACAGAGTCATTGGGTTGAAGAAGACCATGGTTTATTACAGAGGCAAAGCTCCTTCCGGAAGAAAAACCAAGTGGAAGATGAACGAATACAGAGCTATTGAATTCTCTCACCAATCCTCCGTCGCCACTCCCAAGTTGAGGAACGAATTTAGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTTTCGAGCATTTGATCGCCGCCCTTTAGCTTCTTCAACAAGTGGTCACGATCAGAATACGAGGTTGCATGAATCGAGCTCACTTGGAACGTCACCCACAGTCCCAGATGGTGGGCGATCGAGTCGTGTAAATAACGAGGAAGAAGAAAAACCTCTGTGGGACTGGGAACACTTCACTTGCGGCGATGCTTCTGTTAATTTTGATTCAAATCCTTGA 711 0.4895 MEDLPPPGFRFYPTEEELVAFYLHNKLQGPSDHINRVIPDVGIYDFEPSELPKMAGEMCRGDTEQWFFFSPRQERETRGGRPTRSTACGYWKATGSPGYVYSSDNRVIGLKKTMVYYRGKAPSGRKTKWKMNEYRAIEFSHQSSVATPKLRNEFSLCRVYVISGSFRAFDRRPLASSTSGHDQNTRLHESSSLGTSPTVPDGGRSSRVNNEEEEKPLWDWEHFTCGDASVNFDSNP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0339 236 Gene3D NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Alju02g0339 236 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Alju02g0339 236 MobiDBLite consensus disorder prediction 173 219 - -
Alju02g0339 236 MobiDBLite consensus disorder prediction 176 205 - -
Alju02g0339 236 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 179 - -
Alju02g0339 236 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Alju02g0339 236 ProSiteProfiles NAC domain profile. 5 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0339 Alju-ChrAlju02 2600563 2601615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0339 1 224 NAC Transcription Factor Family AT5G22380 56.067 1.11e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g0339 NAM 5e-31 No_clan