Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0325 ATGTGCAGAGAAGAAACGAGACAGGCATCACAAAGTCCAACAGGTGGGATGTATCATCATAATCACCAGAATCACGCAAAGAACTTGCATTCTTCTTCTTCTTCTTCCAGAATGACGATTCCTTCTGAGAGGCATTTGTTCCTTCGAAGTGGAAATGGGTCTGGAGATTCTGGGCTTGTGCTTTCAACTGATGCTAAACCCAGGTTGAAATGGACACCAGATCTTCATGCCCGATTTATTGAAGCAGTCAATCAGCTAGGAGGAGCTGACAAAGCAACTCCAAAAACGGTAATGAAACTCATGGGGATTCCTGGGCTTACTTTATATCATCTTAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTGCATGGACAAAGTAGCAGTAGTGTAACACACAAAATCACAACAAATGCAAGTGCCGTTAGCGGAGAAAGAATTTCTGAAGCAAATGGAACTGATCATTATCACAATCATATGAACAATCTAACCCTTGGGGCGCCGCAGCCTAATAATAACAAAGATTTACATATAAGCGAGGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTTCAAAGACACTTGCAGCTGCGAATAGAGGCACAAGGGAAATACCTGCAGGCAGTGCTGGAGAAAGCACAGGAGACGCTTGGGAGACAGAATTTAGGAATAGTAGGTCTCGAAGCTGCCAAAGTTCAACTCTCAGAACTAGTTTCCAAAGTATCCTCTCAGTGTCTGAGTTCTGCTTTTTCAGAGCTGAAGGAATTAAACACATTCTGCCCACGAACCAACCAACCCAATGACTGCTCCATGGACAGTAGCCTCACTTCCTGCGATGCATCTCAAAGGGATCATCAGGATATGCCCCTTGCTGGTGGTATGTGCTTAACCAGACCTTTTAATGGCCACACCTTCATGGAACCCAATAAGGACGCCCCTGAGGCCAAAAAGAACAATAATAATTTTCTGAACCCTTTGGGGAAGAATATATCAGAAAGAAGTACTGGCAACTTAACAATGAGCATTGGAGTTGAAGGAGAAACGAGAAATGGAAGCAGCAGCATCTATCCTGAGAGAATAAGCACCAACAATAGAACAGAAGGGATGAGATTAGGAGTGGACGAAAAAGTTGCCGGAGATTATAGATTGCCGTACTTTGCGGCACCAAGACTAGACCTTAACACCCACCAAGAAAACGATGGTGCCGCCAGTTGTAAACAACTGGACCTCAATGGATTCAGCTGGAACTGA 1275 0.4431 MCREETRQASQSPTGGMYHHNHQNHAKNLHSSSSSSRMTIPSERHLFLRSGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSSSSVTHKITTNASAVSGERISEANGTDHYHNHMNNLTLGAPQPNNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLSSAFSELKELNTFCPRTNQPNDCSMDSSLTSCDASQRDHQDMPLAGGMCLTRPFNGHTFMEPNKDAPEAKKNNNNFLNPLGKNISERSTGNLTMSIGVEGETRNGSSSIYPERISTNNRTEGMRLGVDEKVAGDYRLPYFAAPRLDLNTHQENDGAASCKQLDLNGFSWN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0325 424 Pfam MYB-CC type transfactor, LHEQLE motif 178 224 IPR025756 -
Alju02g0325 424 NCBIfam myb-like DNA-binding domain, SHAQKYF class 66 121 IPR006447 GO:0003677
Alju02g0325 424 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Alju02g0325 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Alju02g0325 424 Coils Coil 180 200 - -
Alju02g0325 424 FunFam Myb family transcription factor 65 123 - -
Alju02g0325 424 MobiDBLite consensus disorder prediction 1 39 - -
Alju02g0325 424 Gene3D - 65 123 - -
Alju02g0325 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 313 IPR044848 GO:0003700
Alju02g0325 424 Pfam Myb-like DNA-binding domain 68 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0325 Alju-ChrAlju02 2511184 2513796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0325 98 424 G2-like Transcription Factor Family AT3G04030 46.264 2.14e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju02g0325 Myb_DNA-binding 3.7e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0325 02 2511184 2513796 Alju10g0450 10 3642022 3644407 CCT