Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0322 ATGACTTCTTTCTGGGAAAAAGCAAGAGAATGGTCTGAAGAGCTTTGCATGGCGACCCACAGAGTGGGAGAAACTGGTTTATCTGAGTCAGCACCTTCAACTTCAAGTCACCTGCATGCTCCATACGGGGTTCTTCATGGGATTAGTTCTCCTTCATCCAGCTTAGTCAATCAAGGATCTGGTTATTATTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAGTCAAGATTAGGAGTGAAGAAGCGAAAGCATCTTTATTCACAGGCAAGCCTGCAACTACACTAGCAATGTTCCCTTCATGGCCCATGAGATTCCAGCCCACCCCAAGAGAAGGTGGTTCAAAATCCGGAGGAGAGAGCACTGATTCTGAATCAGGATTGAATACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCAGAATCTCCCATGAGTAAAAAAGCATCCTGTACAAATTATCAGGCCTTTGATCAGCAGCAGCTACAGCAACTAGAACAGGATATGGCTAGCGATGCCTCAAGATGCCAAACACTACAGAATCGGAATCAATCACCTACTAATCCATTTCAGGCAAAGAGGAAGGGAGGCGGTTCTACATCAGAGAAGCTACTTGATCCGAAGACACTGAGGCGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCGTACGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTTCCCAGCTCGAACAAGAGCTTCAAAGAGCACGCTCTCAGGGACTATTGGTGGGCTGCGGCGGCGGGGCTGCTAGTGGCAATATAAGTTCCGGTGCAGCGGCAATATTCGACATGGAATATGGGAGATGGTTGGAAGAAGACCAGCGGCACATGGAGGAGCTGCGGCGGAGCTTGGAGGCAGCGGTGCCGGAGAGTGAACTGAGAGTGATGGTGGAGAATTATCTGAGACACTACGACGAGATATTTGAACTGAAGGGAGTGGCAGCAAAATCAGACGTGTTTCACGTCATGAACGGAATGTGGACCACCCCCGCCGAGCGATGTTTCCTCTGGATTTCTGGCTTCCGACCCTCCGATCTCATTGGGATGTTGATACAGCAGCTAGAGCCAGTGGCGGAGCAGCAAATATTAGGGATGTGTGAGCTGAGGCAGTCGACACAGCAGGCGGAGGAGGCTCTGAGTCAAGGACTCGACCAGCTTCAGCATTCTCTTCTTCACACCGTCGTCGGAGGCCTCGCCGTCGACGGCGTTCAACAGATGCTTCTGGCCATGACCAAGCTTTCCAATCTTGAAGCCTTTATCCGCCAGGCTGATAATTTGAGGCAGCAAACACTCCACCATTTGTGTCGACTACTAACAGTTCGTCAAGCAGCAAGATGTTTTCTTGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGTCATTGATCAACGATGAGACATGCCACCAAATAACAACGAACATACCAATAGTTCATCAGTCGTCCCAGAATCATTTCTCAAGTTTCTGA 1548 0.4871 MTSFWEKAREWSEELCMATHRVGETGLSESAPSTSSHLHAPYGVLHGISSPSSSLVNQGSGYYFGGLEEAILQGVKIRSEEAKASLFTGKPATTLAMFPSWPMRFQPTPREGGSKSGGESTDSESGLNTISSKTEAQFEPESESPMSKKASCTNYQAFDQQQLQQLEQDMASDASRCQTLQNRNQSPTNPFQAKRKGGGSTSEKLLDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQELQRARSQGLLVGCGGGAASGNISSGAAAIFDMEYGRWLEEDQRHMEELRRSLEAAVPESELRVMVENYLRHYDEIFELKGVAAKSDVFHVMNGMWTTPAERCFLWISGFRPSDLIGMLIQQLEPVAEQQILGMCELRQSTQQAEEALSQGLDQLQHSLLHTVVGGLAVDGVQQMLLAMTKLSNLEAFIRQADNLRQQTLHHLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRESLINDETCHQITTNIPIVHQSSQNHFSSF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0322 515 MobiDBLite consensus disorder prediction 113 151 - -
Alju02g0322 515 SMART brlzneu 205 263 IPR004827 GO:0003700|GO:0006355
Alju02g0322 515 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Alju02g0322 515 Gene3D - 208 257 - -
Alju02g0322 515 MobiDBLite consensus disorder prediction 168 196 - -
Alju02g0322 515 MobiDBLite consensus disorder prediction 98 151 - -
Alju02g0322 515 MobiDBLite consensus disorder prediction 168 211 - -
Alju02g0322 515 FunFam BZIP family transcription factor 208 257 - -
Alju02g0322 515 Coils Coil 163 183 - -
Alju02g0322 515 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 251 IPR004827 GO:0003700|GO:0006355
Alju02g0322 515 SUPERFAMILY Leucine zipper domain 209 251 IPR046347 GO:0003700|GO:0006355
Alju02g0322 515 Pfam bZIP transcription factor 209 249 IPR004827 GO:0003700|GO:0006355
Alju02g0322 515 CDD bZIP_HBP1b-like 209 260 - -
Alju02g0322 515 PANTHER TRANSCRIPTION FACTOR TGA9 159 486 - -
Alju02g0322 515 Coils Coil 228 255 - -
Alju02g0322 515 Pfam Seed dormancy control 292 366 IPR025422 GO:0006351|GO:0043565
Alju02g0322 515 ProSiteProfiles DOG1 domain profile. 275 483 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0322 Alju-ChrAlju02 2485498 2492018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0322 182 515 bZIP Transcription Factor Family AT1G08320 66.766 2.40e-158 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju02g0322 DOG1 4.3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0322 02 2485498 2492018 Alju10g0444 10 3606892 3613337 CCT
Alju02g0322 02 2485498 2492018 Alju02g0322 02 2485498 2492018 ECH