Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0297 ATGATTATGAATCAAGGGCCCCATATCTGTAACGAGGGAAAAATTTGGGCACTGAGTTCAGTACAGGGATTAAAATTTTCCGAGAACAGAGACCGAAGGAGCAACGAGTTAACGACGATGGACGACTCTGAGGCGCTCGGAAATTCCAACCCTACCGACAGAGAAAAAGCAAAGAAGCAGAAGGTGGTGGTGATAATGGGTCCCACTGGCTCTGGGAAGTCCAAGCTCGCCATTGATCTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCACCAACAAAGTTCCACTCTCGGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACCGTAGGTCCAAACGTGGAATTCACGGCTAAAGAATTTCGAGATTCTGCTACCCCTCTCATCAATGACATATCTGCTCGCAACTGCTTGCCTGTCATAGTTGGGGGTACGAATTATTTCATCCAGGCTCTCGTGAGTCCATTCCTTCTTGATGAATCACTTGAAGATATGGACGAAACCTGTATGGACAACCTGTCTGGTACTACACCGTTGGATAAGAGTTTCATCGCTGAAAAGAACAGTTCAAACAATAATTATGATTTGCTTAAAGATATTGATCCAGTTGCCGCAAATAGAATGCATCCAAATAATCATAGAAAGATTAGTCAATACCTTAGTTTGTATGCTCGCACTGGTGTTCTTCCGAGCAAAATTTTCCAAGGAAAAGCAGCGGAGAAGTGGGGTCAAGTTGGTAACTCCAGATATGATTGCTGTTTTGTATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACGATCCAAATGCTGATTATAGTCGAGGCTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAACCTCTTCTGAAACACCCTGTAATTGAAGAAATCTACAGAAGAGAGAGAGAATTGACGGAGGATTCCAGGCGTGAAAAGGGTGATAAATTGTCTAATTACGATTTGAGGGAGCTCTTGAAGTTATCTTCTGACATGAAATCCATTGCACTTATGGAAGAAGCAATTGAAAAAGTAAAGGTTAACACGCAGAGACTAATCCGCCGTCAGAAGAGGATGGTTAATCGACTGCAAAAATTGTTTGATTGGACCATACACTACGTGGATTCCACGGAATCATTATCAAGTAGATCAGATGACATATGGACTGGCCAAGTGGTGGAGCCTGCGGTGAAGATCGTTAGATCTTTCCTTGGTAATAATGAGAGCTTGTCATCCACGTCTGTGACATCAAATAGCAGTGGGATGAAGATACTTCAAAGGGACCTCTGGACCCAATACACATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAATACATGAATGGGAACAGCACAAACAAGGTCGTGGACACCGGAAACGTATTTCTAGTCTCAAGAACAAATCACAAGCTCTCTGTTTGGTGGAACAATAG 1536 0.4434 MIMNQGPHICNEGKIWALSSVQGLKFSENRDRRSNELTTMDDSEALGNSNPTDREKAKKQKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTVGPNVEFTAKEFRDSATPLINDISARNCLPVIVGGTNYFIQALVSPFLLDESLEDMDETCMDNLSGTTPLDKSFIAEKNSSNNNYDLLKDIDPVAANRMHPNNHRKISQYLSLYARTGVLPSKIFQGKAAEKWGQVGNSRYDCCFVCVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYDPNADYSRGLRQAIGVREFEPLLKHPVIEEIYRRERELTEDSRREKGDKLSNYDLRELLKLSSDMKSIALMEEAIEKVKVNTQRLIRRQKRMVNRLQKLFDWTIHYVDSTESLSSRSDDIWTGQVVEPAVKIVRSFLGNNESLSSTSVTSNSSGMKILQRDLWTQYTCKACGDRVLRGIHEWEQHKQGRGHRKRISSLKNKSQALCLVEQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0297 511 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 274 405 - -
Alju02g0297 511 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 59 438 IPR039657 -
Alju02g0297 511 Gene3D - 192 245 - -
Alju02g0297 511 Gene3D Classic Zinc Finger 462 506 - -
Alju02g0297 511 Hamap tRNA dimethylallyltransferase [miaA]. 62 415 IPR018022 GO:0008033
Alju02g0297 511 Gene3D - 59 168 IPR027417 -
Alju02g0297 511 Gene3D - 259 438 IPR027417 -
Alju02g0297 511 MobiDBLite consensus disorder prediction 29 59 - -
Alju02g0297 511 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 62 326 IPR018022 GO:0008033
Alju02g0297 511 FunFam tRNA dimethylallyltransferase 462 505 - -
Alju02g0297 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 169 IPR027417 -
Alju02g0297 511 Pfam IPP transferase 95 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0297 Alju-ChrAlju02 2271803 2275543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0297 65 501 C2H2 Transcription Factor Family AT2G27760 57.823 1.75e-178 508