Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0289 ATGCAAGGCCCACAATTCCTGCGGTTTCTCCCTTTCACTCCCATAAACCCTTCTCGCAACCCTTTTCCGCGTCGTCCTTCCGTTCCTCATCTGCTAATGGAGTTCTGGGGTGTTGAGGTTAAGGCTGGGGAGCCCGTTAAAGTTGATCCTCAAGATTTTGATTCCTACATTCATATTTCTCAGGCTGCCCTAGGTGAGACAAAGAAAGATAAGGGAGCTGAACCTGTGGTTCTTTACTTGAAATTTGGTGACCAGAAGATTGTTTTGGGAACCCTTTTAAAGGATAATTTCCCCCAGATATCGTTTGACTTAGTTTTGGAAAAGGAGTTTGAGCTCTCCCACAATTCAAAAAATGGGAGCGTCTTTTTCTGTGGATATAAAGCCGAACTCCCCGAAGAAGAATATCCTTTGCCGTTCATCACTTTGTTTTTTCTTTTTTTCAAATTCTTAAATGTATTTTAA 462 0.4199 MQGPQFLRFLPFTPINPSRNPFPRRPSVPHLLMEFWGVEVKAGEPVKVDPQDFDSYIHISQAALGETKKDKGAEPVVLYLKFGDQKIVLGTLLKDNFPQISFDLVLEKEFELSHNSKNGSVFFCGYKAELPEEEYPLPFITLFFLFFKFLNVF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0289 153 Gene3D Nucleoplasmin core domain 30 132 - -
Alju02g0289 153 Pfam Nucleoplasmin-like domain 35 126 IPR041232 -
Alju02g0289 153 FunFam Histone deacetylase HDT1 33 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0289 Alju-ChrAlju02 2202386 2203965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0289 33 134 C2H2 Transcription Factor Family AT5G03740 52.941 2.90e-30 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0289 02 2202386 2203965 Alju10g0409 10 3230692 3240259 CCT
Alju02g0289 02 2202386 2203965 Alju02g0289 02 2202386 2203965 ECH