Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0288 ATGATGACTTTGATGACATATCTGGTGAACAGTGAAGAGGATGTGGATCTCCCAGTGATGGCAAAAGATAATGGAAAACCTGATACCAAGACTGGCCTAGCTAAGGTTGCCCCATCCAAAAAAAGTGATGCCACTGTTAATGATTCCAAAAAGCAAGCCAAGGTTGAACCTAAGGATGAAGAAGGTGATGATTCTGAAGATGATGACGACTCTGATGAAGATGATGATGAAGGTGGCTTTGATGAGGATATGATGGATGCTGATAGTGATGAGGAGAGTGATGAGGATGAAGATGACGAGGAGACTCCCAAGAAGCAGACTCCCAAGAAGGCGGATCTGAGCAAGAAGAGACCCAATGACTCTGCATCAAAAACTCCAGTTTCTGCCAAGAAAGCTAAGTCCGGCACTCCTGAAAAGAATGATGCTAAGAAAGGTGGTCATACCGCAACTCCTCACCCAATGAAGAAGGGGACGAAGACTCCTAACAGTGAAGCCAAGGAGCCCAAGTCTGGTGGACAATTGTCCTGCAAATCTTGCAGCAAGACATTCAACTCTGAAAGTGGTTTCCAACAACATAACAAGGCAAAGCATGGTGGTCAGTGA 603 0.4527 MMTLMTYLVNSEEDVDLPVMAKDNGKPDTKTGLAKVAPSKKSDATVNDSKKQAKVEPKDEEGDDSEDDDDSDEDDDEGGFDEDMMDADSDEESDEDEDDEETPKKQTPKKADLSKKRPNDSASKTPVSAKKAKSGTPEKNDAKKGGHTATPHPMKKGTKTPNSEAKEPKSGGQLSCKSCSKTFNSESGFQQHNKAKHGGQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0288 200 MobiDBLite consensus disorder prediction 134 148 - -
Alju02g0288 200 SUPERFAMILY beta-beta-alpha zinc fingers 167 196 IPR036236 -
Alju02g0288 200 MobiDBLite consensus disorder prediction 164 194 - -
Alju02g0288 200 MobiDBLite consensus disorder prediction 102 119 - -
Alju02g0288 200 ProSitePatterns Zinc finger C2H2 type domain signature. 176 197 IPR013087 -
Alju02g0288 200 MobiDBLite consensus disorder prediction 44 59 - -
Alju02g0288 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 200 IPR013087 -
Alju02g0288 200 MobiDBLite consensus disorder prediction 60 101 - -
Alju02g0288 200 MobiDBLite consensus disorder prediction 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0288 Alju-ChrAlju02 2200700 2202083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0288 113 197 C2H2 Transcription Factor Family AT5G03740 47.423 2.86e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju02g0288 None None None