Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0274 ATGGCGGAGGACCGCAACGGCGACAAGAATGAAAACAGTGACTACAGTTCAGAGGATGAAGGAACTGAGGATTACAGGCGAGGAGGTTACCATGCCGTTCGAATTGGCGATACTTTCAATAATGGGTGCTATGTGGTGCAGGCCAAACTTGGTTGGGGTCATTTTTCTACTGTCTGGCTTGCTTGGGACGTCCAGAGATCGTGTTATGTGGCCTTAAAAATTCAAAAGAGTGCTCAGCACTATACTGAAGCTGCCATGGATGAAATAAAGATTCTTAAACAGATTGCAGAAGGGGACCCAGATGACAAGAAATGTGTTGTAAAGCTATTGGATCACTTCAAGCATTCTGGTCCTAATGGTCAGCATGTATGTATGGTGTTTGAATTTCTGGGTGACAATCTTCTGACACTTATCAAGTACAGTGATTACAGAGGGGTTCCTCTCCCTATGGTCAAAGAAATTTGCTACCATATTTTGGTGGGCTTGGATTACCTTCATCGAGAGCTTTCCATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTATGATAGATCCGTCAAAGGATCACAGAAAGTCAGGTGCCCCACTCATCCTTCCGAGCAACAAGGGCAATTTTGTATCCAAGAATGAGGTCACAAAAGATAATGCTAGTTCGAATGGAAATCCGATAAAAAACCCAAAAAGGAAAATGCATAGAACGGCTAAGGTTGAGAATGAAATTATTGAGGCTGAGGTTTCTAAAGCCCATGATCAAGAAGATTCTAGGGATGATCTAAAATCGAATGTTGAATCTGTTGAAGATAAACCCAGTAGTTCGGTGAGTAAAGATGAACCAACAAAGACTAACGAAACTAAGGATGTTCCACAAGGAAGTCAGAGTCAGAGGAAAAGTAGCCGCTCCATGAGAAAAAAGTTGCTTGCAGCTGTTGATCTAAAGTGCAAACTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCGGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGCTGGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATCGCACTAGGTGGCAGCTATTCCCGCGAATTTTTCAATAGATATGGTGATCTAAGGCACATTCGTCGGTTGCGGTTCTGGCCTCTTAATAAGGTGCTTATGGAGAAGTATAATTTCAGCGAGCAAGACGCAAAAGACATGACAAACTTCCTTGTTCCCATACTTGATTTTGTCCCAGAAAATAGGCCAACAGCTGCTCAGTGTCTTAGTCATGCCTGGTTCAGTGCTGGTCCTCGTATTCTTCAGCCCTCTACAACTAGTGTGCAACGTGAGGCCATTGAGGGGGGGATGTCTGAAGAAACAAAGCGGGATAAGGCTCGGCAGGAAGCTGTGGAAGTTGGTGTGGGCAATATAGCCATTGATGGAACTCCAAAGCCACTCAAAAAGTCCCAATCTGTTAAGTGA 1614 0.4325 MAEDRNGDKNENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGCYVVQAKLGWGHFSTVWLAWDVQRSCYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICYHILVGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDHRKSGAPLILPSNKGNFVSKNEVTKDNASSNGNPIKNPKRKMHRTAKVENEIIEAEVSKAHDQEDSRDDLKSNVESVEDKPSSSVSKDEPTKTNETKDVPQGSQSQRKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGSYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYNFSEQDAKDMTNFLVPILDFVPENRPTAAQCLSHAWFSAGPRILQPSTTSVQREAIEGGMSEETKRDKARQEAVEVGVGNIAIDGTPKPLKKSQSVK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0274 537 SMART serkin_6 44 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0274 537 SUPERFAMILY Protein kinase-like (PK-like) 39 486 IPR011009 -
Alju02g0274 537 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 500 - -
Alju02g0274 537 ProSiteProfiles Protein kinase domain profile. 44 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0274 537 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Alju02g0274 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Alju02g0274 537 MobiDBLite consensus disorder prediction 248 287 - -
Alju02g0274 537 MobiDBLite consensus disorder prediction 1 23 - -
Alju02g0274 537 Gene3D Transferase(Phosphotransferase) domain 1 127 478 - -
Alju02g0274 537 CDD STKc_SRPK 33 477 - -
Alju02g0274 537 MobiDBLite consensus disorder prediction 248 305 - -
Alju02g0274 537 FunFam CMGC/SRPK protein kinase 30 129 - -
Alju02g0274 537 MobiDBLite consensus disorder prediction 206 228 - -
Alju02g0274 537 FunFam Serine/threonine-protein kinase SRPK-like protein 307 477 - -
Alju02g0274 537 Coils Coil 252 272 - -
Alju02g0274 537 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Alju02g0274 537 MobiDBLite consensus disorder prediction 194 236 - -
Alju02g0274 537 Pfam Protein kinase domain 314 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0274 537 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0274 Alju-ChrAlju02 2091527 2094015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0274 1 528 EF-hand Containing Proteins AT5G22840 65.472 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Alju02g0274 Pkinase 1e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0274 02 2091527 2094015 Alju10g0391 10 3129590 3133078 CCT
Alju02g0274 02 2091527 2094015 Alju02g0274 02 2091527 2094015 ECH