Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0272 ATGCCTCGCCGCAGCGGAAAGCTACCCCAGCACCAACCTTCTCCGGCGCCATCCCAATCTGCCCGGGGTCCAGATGTTGCTCCATCCAGGCCACAAGGCGCCGCTCCCTCTGCCGCTCCGACTGATGAGTTGGGGCAGCTAACATTGCAGTCTCCGGCGCCGTCATCGTCAAAGGCCACGAGATTTCCCGACCGACCAGATTTTGGTAGAATGGGGAGAAGAATTCAAGTCCGTGCAAATCACTTCCTGGTCGATGTGGCCGATAGGGATCTTCACCACTACGATGTATCCATTACTCCGGAAATCACATCAAAAAAAATCAATAGAGATGTGATGAATCAACTACTTCATATGTACGGAGTGTCATATATGAACAAGAGAATACCAGCTTATGATGGCCGGAAGAGTCTTTTCACAGCAGGTCCTTTGCCCTTTGAATCAAAGGAATTTGTTGTCAAGTTGCTAGCCAAAGATGAACATGCCAGTTCTTCTGGTTCAACGAGGAACAAACGTGAGCGCGAGTTTAAGGTTACCATTCGTTATGCTTCCAAGGCTGATCTCCATCATTTGCAGCAGTTTCTAAGAAGTCGACAGCTGGACAATCCACAAGAAACAATTCAAGCACTTGATGTTGTCCTGAGGGCATCACCATCTGAAAAGTATACTGTTGTTGGAAGATCTTTTTTCTCACCAAGTTTGGGTCAAACTGGTGAGCTGGGTGATGGAATAGAATATTGGAGAGGATATTATCAAAGTCTTCGCCCGACCCAGATGGGACTTTCCCTTAATATTGATGTATCAGCAAGGGCATTTTACGAAAACATCTTTGTGACTGAGTTTATTGCAAAGCACTTTAATTTTAATTTTTCGAGGCGTCTGTCTGATCAAGACAGAATTAAGGTAAGGAGAGCTTTGAGAGGAATAAAGGTAGAATTTACTAATGGTCATGTTACTAGAAGTTACAGAATTACTGGACTCTCAAAGGAGCCACTGAGCGAGTTGATGTTCACTCTTGATGACAAGAAAACAAAAACTACTGTTGTTCGATATTTTCATGAGAAATACAATGTTGAACTCAAGTATTTGTCGCTTCCTGCCCTCCAAGCTGGGAATGATGCAAAGCCTATTTATTTGCCTATGGAGCTTTGCAAGATAGCTGCTGGGCAAAGGTACTCAAAGAAACTGAATGAGAGGCAAGTAACTGCTCTTTTGAGAGCAACCTGTCAGCGACCTCTTGACAGGGAGAAGGACATCAGAGGGGTGGCCAGGCGTAACAATTTTAACAGAGACAAGCTCGTGCAAGAATTTGGACTTAACGTGAGTGACGAACTGGCATTGTGTGATGCACGTGTTTTGCCTCCTCCAAGGCTTAAATATCATGAAACTGGGAAGGAAGCAATTGTTGAACCCTCGAGGGGTCAGTGGAATATGATAAACAAGAAAATGTATAATGCTGGAAGTGTGCAATATTGGACTTGTCTTAACTTTTCTACACGAGTGAGCAGAGATTTGCCACTTCAATTCTGTAACGAGTTGATAAGTATGTGCACCAGTAAGGGATTGGTTTTCAATCGAACCCCTTTACTTCCTATAAGGTCAGCTCATCCTAGTCAAATAGAGGGAGTTCTTAGAGAAGTTTACAAGCAAGCTGGTAAAGGGAAACTTCAACTGTTGATTATAATCTTGCCTGACTTCAAAGGTTCTTATGCAAAGATTAAACGCATCTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAAGGAAGCTGTAAAGCTACAGAAGCAATATCTTGAAAATTTGGCCCTCAAGATCAATGTTAAGGTTGGGGGGCGCAACACAGTTTTGATGGATGCTGTCCAGAGGAGAATTCCTCATGTGACCGATCGCCCTACCATAATATTTGGCGCGGATGTAACACACCCTCAGCCAGGGGAGGACTCGAGCCCTTCCATAGCAGCAGTAGTAGCATCCATGGATTGGCCAGAGGTTACTAAGTATCGTGGAATTGTTTCTGCCCAGTCACACAGAGAAGAGATCATACTAGATCTCCACAAAACTTATCAGGATCCTGACAAGGGAGTTGTACATGGTGGAATGATCAGGGAGCTACTTGTGGCATTCTATAAATCAACTAAATTTAAGCCAGACAGGATTATATTCTACAGGGATGGAGTTAGTGAAGGCCAATTCAGTCAGGTTTTACTCTATGAAATGCAAGCCATAAGAAAGGCTTGTGCCTCGTTACAGGAAGGATATCAGCCAAGAGTAACCTTCTTGGTGGTACAAAAAAGACATCACACCCGATTCTTTCCTGTTAATCATAACAGTCATGATCAGACGGATAAAAGTGGAAATATTTTGCCAGGCACTGTTGTTGATACTCGTATTTGCCATCCTAGAGAGTTTGATTTTTACCTCAACAGCCATGCTGGCATTAAGGGAACTAGCCGACCTACGCACTATCATGTTCTATTTGATGAGAACAATTTCAAAGCCGATGAGTTGCAGACTTTAACCAATAACCTGTGTTACACGTATGCAAGGTGCACTAAGTCAGTGTCAATAGTTCCTCCTGCATACTATGCCCATTTGGCTGCCTTCCGTGCTCGCTACTATATTGAAGGTGAGACATCAGATGTGGATTCTGGAAGTGGAAGTAGGAGCACTAATGTAGCGGTAACTCTTCCGGCTGTCCTGGACAATGTCAAGGATGTTATGTTTTACTGCTAA 2739 0.4385 MPRRSGKLPQHQPSPAPSQSARGPDVAPSRPQGAAPSAAPTDELGQLTLQSPAPSSSKATRFPDRPDFGRMGRRIQVRANHFLVDVADRDLHHYDVSITPEITSKKINRDVMNQLLHMYGVSYMNKRIPAYDGRKSLFTAGPLPFESKEFVVKLLAKDEHASSSGSTRNKREREFKVTIRYASKADLHHLQQFLRSRQLDNPQETIQALDVVLRASPSEKYTVVGRSFFSPSLGQTGELGDGIEYWRGYYQSLRPTQMGLSLNIDVSARAFYENIFVTEFIAKHFNFNFSRRLSDQDRIKVRRALRGIKVEFTNGHVTRSYRITGLSKEPLSELMFTLDDKKTKTTVVRYFHEKYNVELKYLSLPALQAGNDAKPIYLPMELCKIAAGQRYSKKLNERQVTALLRATCQRPLDREKDIRGVARRNNFNRDKLVQEFGLNVSDELALCDARVLPPPRLKYHETGKEAIVEPSRGQWNMINKKMYNAGSVQYWTCLNFSTRVSRDLPLQFCNELISMCTSKGLVFNRTPLLPIRSAHPSQIEGVLREVYKQAGKGKLQLLIIILPDFKGSYAKIKRICETELGIVSQCSQPKEAVKLQKQYLENLALKINVKVGGRNTVLMDAVQRRIPHVTDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQSHREEIILDLHKTYQDPDKGVVHGGMIRELLVAFYKSTKFKPDRIIFYRDGVSEGQFSQVLLYEMQAIRKACASLQEGYQPRVTFLVVQKRHHTRFFPVNHNSHDQTDKSGNILPGTVVDTRICHPREFDFYLNSHAGIKGTSRPTHYHVLFDENNFKADELQTLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYIEGETSDVDSGSGSRSTNVAVTLPAVLDNVKDVMFYC 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0272 912 CDD PAZ_argonaute_like 277 386 - -
Alju02g0272 912 MobiDBLite consensus disorder prediction 43 58 - -
Alju02g0272 912 FunFam Argonaute 10 451 619 - -
Alju02g0272 912 Pfam Argonaute linker 1 domain 224 273 IPR014811 -
Alju02g0272 912 Pfam Piwi domain 559 876 IPR003165 GO:0003676
Alju02g0272 912 SUPERFAMILY PAZ domain 75 428 IPR036085 GO:0005515
Alju02g0272 912 ProSiteProfiles Piwi domain profile. 557 877 IPR003165 GO:0003676
Alju02g0272 912 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 56 878 - -
Alju02g0272 912 Gene3D paz domain 269 391 - -
Alju02g0272 912 SMART Piwi_a_2 557 877 IPR003165 GO:0003676
Alju02g0272 912 SUPERFAMILY Ribonuclease H-like 544 877 IPR012337 -
Alju02g0272 912 Gene3D - 625 912 IPR036397 GO:0003676
Alju02g0272 912 Pfam PAZ domain 299 403 IPR003100 GO:0005515
Alju02g0272 912 Pfam N-terminal domain of argonaute 73 213 IPR032474 -
Alju02g0272 912 MobiDBLite consensus disorder prediction 1 70 - -
Alju02g0272 912 Pfam Argonaute linker 2 domain 413 459 IPR032472 -
Alju02g0272 912 SMART DUF1785_2 222 274 IPR014811 -
Alju02g0272 912 Pfam Mid domain of argonaute 470 548 IPR032473 -
Alju02g0272 912 Gene3D - 451 619 - -
Alju02g0272 912 FunFam protein argonaute 10-like 625 912 - -
Alju02g0272 912 ProSiteProfiles PAZ domain profile. 275 387 IPR003100 GO:0005515
Alju02g0272 912 SMART PAZ_2_a_3 279 407 IPR003100 GO:0005515
Alju02g0272 912 CDD Piwi_ago-like 433 876 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0272 Alju-ChrAlju02 2067744 2072931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0272 52 912 Eukaryotic Initiation Factors Gene Family AT1G48410 61.443 0.0 1113