Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0263 ATGGCTATTGCTGGACTACATAATCTGTCTGTGCTTGACTCTTCTTTTCTTAGGGATTCCCATTCTCAATCACCCAGGAGGCGAGGAGATGGGGGGAGTGGAAGCACCCGATCATCTTCGATCTTGCAAATGTGGCGAGAGATTGAGGATGAGCATGTTGTGGGCCAAGTCCAAGGAAGACCTGGTGATGGTTTACTTCAGCAAAGGAGTGATGAGTTCATCACTGACCTCTCACAGGCAAGTATGCCAAGTAGCCATGAGACAGGAGAGAGGCATGCAGTAGAAGATTCAATTTTGGGTGAGAATGATTGTGAAACATGGTCACAGTCACAGAGTCAGCATGAATCTCCTGATGAGCAGGAGGAATTAAACAATTCTGGTTGTGATAATTCTTCTGATCTTGGAGAAGTTGAAAGGGAAAGGGTGAGGCAAATTTTCAGGGAATGGATGAAAAGTGGTGCTGGGGATCGAGCCACAGACATTCCCCAAGGTAATAGCAGTTCAAGATCAGAATGGCTCGGTGAAACTGAGCAGGAGAGGGTGAGAATCATAAGGGAGTGGGTACAACTGAGTAGCCAGCAGAGAGTTATTTCTTCTGGGGACAACAGGGAAGAACAATCAGCTGAAGTTGGTACCCAAATAGATCGAGTTCGTGATGGGTTTGCTGTTAATCAGAATGAGGGTCAAACTGAGCATATGCGAAGGGGTATTCGTAAACTATGTGGCAGACAGGTTCTACTTGATATGCTTAAGAAGTCTGAGAAGGAAAGACAAAGAGAAGTTCAGGAATTATTGGACCATAGAGCAGTATCTCATTTCCCCCATCGCAACCGCATTCAGGCATTGCTTAGGGGTAGATTCTTGAGAAATGACAGGTCAATTGATGCTAGCCGGTCCACTTCCATAGCTGAAAGTGAATTGGGCTTGCTGAGGCAAAAACAAACTGTATCAGGTCTAAGGGAAGGGTTTTTCTCTGGGAAGGACTGTTCTGGTGGCAGTCAAGCAACTTCCACTCTATCAGATACCTCATCTAACAGTGGCATTGATAATAATTCAAATGAACAAACTGACTCCAGCACTTTACATTCGGTGTCAATTGTACATTTTGAACAGTCTGAACCTACTGTTGGAGATAGTGTAGGAGTTGGGATCCTAGATGGTCAGAATTTTACGCAAGAAATCATTACGGAAAATTTAGATTGCCAAGACTCCACTGCTCATATAGAAGGAAGGTCGTCACAGCTTTTGGAAAATGAGTCAAGAGATTGCCAATCATCATCCAGTGTTGGGATGGAAAGAAGAGATGATAGCGGGCGTTATGTTGTTGGGATGACAGTTGAAGATACCAGTGATGGACTTCTGCAACAAAATTGTCCGATTGAAGTTACAGAACATAGCAATATGCTGGGATCTAGTGAGGTATATCCAGAAGAATTTCAGGCGAGTGTTATAAGAAACGATGATACTGGTTCATCAACTGATAGTGATGTTGTGGAAGCCACTATGGAAGGTAATGAAAATAGGTATGTATCTACTGCTCTGGAAGAACAACAGCAGGAAGAACTTATTGAAAATGAAGGAAGTGATGGGCATCTGAGAAATGGCGCAGAGGAAAGTCTGGGTGATAATCAACCACATGGTACAGCCAGTGAGTGGCCTCAAGACATTTTGAGCAATGAAGATGGGGAAAACTCTCATCCACCGGAAGCCCCAGAAATGTGGCAAGAAGACGGTGGCTTTCAGGAGGCCGTGGAAAATTGGTTGGGTGGACCTTCTGATCATGAAGTTGCTCCAGTTGGTAGAATTCATGGCTTTTATTTTCCTGATGATGACAATGTGAACAGCGTGGAACTCAGGGAACTGCTAAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTTCGTGAAAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCATGTTGAGTGGGAGCTGCAAGAAACGAGCCCTTCTTCTGCCTCAGTTGAACAGGACCTGGAGCAGCCCCGTAGGGATCAGATTGTTGGTCAGGAGGATACTATCAACAGTCCACTTGACCAGCCCTCATCACCAACACCCCCTCAACCTCTCTGGGAACGACATTCACGTCATGACAATTGGTCACGAGCTGACATGAATAATCAGCGCCTAGGAATTGGGCATTCATTTTCTTTGGAATGGGAGATTATCAATGACTTGAGAATTGACATGGCTAGGCTACAGCAAAGAATGAATAATATGCAGAGAATGCTGGAGGCCTGTATGGATATGCAACTTGAGTTGCAGCGCTCAATAAGACAGGAGGTTTCTGCCGCACTAAATCGCTCAGCTGGTTCATCAGATATGCATGATCATGATTCTCCTGATGACAAGTCTAAATGGGAATGTGTGAGAAAAGGACTGTGCTGTATATGTTGCGAGAGTAATATCGATTCTTTGTTGTACAGATGCGGGCACATGTGCACGTGTTCAAAATGTGCCAATGAGTTGTTCCAGAGTAGGAGAAAGTGTCCAATGTGTCAAGCGCCCGTTGTGGAGGTGATACGTGCTTATTCTATTCTATAA 2586 0.4462 MAIAGLHNLSVLDSSFLRDSHSQSPRRRGDGGSGSTRSSSILQMWREIEDEHVVGQVQGRPGDGLLQQRSDEFITDLSQASMPSSHETGERHAVEDSILGENDCETWSQSQSQHESPDEQEELNNSGCDNSSDLGEVERERVRQIFREWMKSGAGDRATDIPQGNSSSRSEWLGETEQERVRIIREWVQLSSQQRVISSGDNREEQSAEVGTQIDRVRDGFAVNQNEGQTEHMRRGIRKLCGRQVLLDMLKKSEKERQREVQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSIDASRSTSIAESELGLLRQKQTVSGLREGFFSGKDCSGGSQATSTLSDTSSNSGIDNNSNEQTDSSTLHSVSIVHFEQSEPTVGDSVGVGILDGQNFTQEIITENLDCQDSTAHIEGRSSQLLENESRDCQSSSSVGMERRDDSGRYVVGMTVEDTSDGLLQQNCPIEVTEHSNMLGSSEVYPEEFQASVIRNDDTGSSTDSDVVEATMEGNENRYVSTALEEQQQEELIENEGSDGHLRNGAEESLGDNQPHGTASEWPQDILSNEDGENSHPPEAPEMWQEDGGFQEAVENWLGGPSDHEVAPVGRIHGFYFPDDDNVNSVELRELLNRRSVSNLLRSSFRESLDQLIQSYVERQGHAHVEWELQETSPSSASVEQDLEQPRRDQIVGQEDTINSPLDQPSSPTPPQPLWERHSRHDNWSRADMNNQRLGIGHSFSLEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSDMHDHDSPDDKSKWECVRKGLCCICCESNIDSLLYRCGHMCTCSKCANELFQSRRKCPMCQAPVVEVIRAYSIL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0263 861 MobiDBLite consensus disorder prediction 686 713 - -
Alju02g0263 861 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 861 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 528 574 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 104 136 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 541 561 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 327 360 - -
Alju02g0263 861 CDD mRING-HC-C3HC5_NEU1 809 858 - -
Alju02g0263 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 785 859 IPR013083 -
Alju02g0263 861 ProSiteProfiles Zinc finger RING-type profile. 809 848 IPR001841 -
Alju02g0263 861 MobiDBLite consensus disorder prediction 27 41 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 329 360 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 18 41 - -
Alju02g0263 861 Coils Coil 737 764 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 153 173 - -
Alju02g0263 861 Pfam Zinc finger, C3HC4 type (RING finger) 806 853 - -
Alju02g0263 861 SUPERFAMILY RING/U-box 808 854 - -
Alju02g0263 861 MobiDBLite consensus disorder prediction 657 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0263 Alju-ChrAlju02 1993357 1996910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0263 809 855 C3H Transcription Factor Family AT3G06140 40.426 3.86e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0263 02 1993357 1996910 Alju10g0380 10 3039899 3043673 CCT
Alju02g0263 02 1993357 1996910 Alju02g0263 02 1993357 1996910 ECH