Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0222 ATGCTTTATGAACCTGCCTTTTATTCATCAGAAATTGCAAGTTTTTCAACGCCTTCTAATACTTTGTCTCCTGAAGGCGAAGAAGTCAAACCAAGTAGACTAATGTTGCCTCACTATGCATCATTCTACCATTCATCTGTATCGGAACCACCAACGTCGTCGTCAGCCGGCGACCAACCCCGAGATAACTTGGGTTATGATTGGATGATTAATTATGGAAGTAGTTCCGGGGTTAATGAAACCAACTATCCTAACTCTAATGTTGCCACTGAGCTGAATGATAACAATTTGTATGTGTATCAGCACCTGGCGAAGCCTAGTTACCACGAACTCATCGGAAGGCAGTTAGGCGAAATGCAAAATCATTCTTCTTCTTCCCCAGCCACGTTTTTTCAGAATACTTTGCACGACATCGTCAAGTATGCTTCTATCAGTGCCCAAGGATCTGATCACATAGTTTCGGAGATGCAAAATCCTGCCCATGGGATCTGGAAGGGAAATCAAAATCAGACAAATTCTCAGGGATTATCTCTATCACTTTCATCAAATTCTCATTCCAAGGCTTCTCTTTCTGGGTTCCCATGTAATGATGGTCACGCATCTCATGAACCTTACTCACGATGTGATAAATCTACAAAATCTGTTACTAAAGATTGTGGAAAATCACTCCAAGACGTCGTGGGAGTAGCTTCGAGCTCTAGTGGTTATAGAAGTAATGTGGGCCCGCTTGGGCCTTTCACTGGATATGCAACCATTTTAAAGAGTTCCAGATTCTTGAAGCCAGCTCAGGAGTTATTGGATGAATTCTGTAATGTGTGTGGATCTAATGGTTCAGATTTCTCGAGGGTGTCTGGAGAAGCCAGTGCCACTAATTCTGCAGCTGAAGCTGTCATTAATAATGCAACTGAAAGTGGGGTTAGTGCAAAAAAGAGTGTTAGTAATAATGCGGGTGCTGCTTCGTGTTCTATTTTGTATAATTCCAAGGAAAATAGTGGTGATTGTGAATCAAGAGGAAGTTTTGATTGTTCTTCTCGATCGGCGCATCAGCAAAAGAAGGCGAAGCTGCTGTACATGCAAGAGGAGGTTACGAGAAAACACAAGCAATATCACCAACAAATGCAAATGGTTGTTTCCTCTTTTGAGTCAGTGGCAGGTCTCAGTTCGGCTACCCCTTATATCTGTATGGCTCTCAAGTCAGTAGCAAGACACTTCAGGATCCTGAAAAATGCCATCTTGGATCAGATCAAGCATTTAAAAGAGTTGTTGGGGGAGGATTTCTCAGGATCCACGTCTGGTACTATTACTAAACTTGACACTGGCGGGCTAGCTTATCTGGACCAAAGCTTCCAGAAGAACAAAACTGCATTTCTCGAACCCCAACAAGTATGGAGGCCCCAAAGAGGCTTGCCAGAACGCGCAGTCGCAATTCTTAAAGCTTGGTTATTTGAGCATTTCCTTCACCCGTACCCCACGGATACTGATAAACACATGCTGGCTACACAAACAGGTCTATCTCGAAACCAGGTATCGAACTGGTTCATAAATGCTCGAGTTCGTGTGTGGAAGCCAATGGTTGAGGAAATACACAATCTTGAAACAAAAGGCATGGTAGGTGGGAACCAGAACGAGGGAACAACATCTGGTGCAGAAGGAAGCAGTCAACAAGCTATGGTTGAAGAAACTCCTCTGGGCAAGTTTGGTAAGCACGGAGATGTAATAATGCCGGAGAGGCAATTCCAGTGTTTGGGAATGAGTTCTTCCTCAGGTGGAGGGAATTCTGAGGGAGTGGGATTTCTTATGGGTTCATCAGAGGAATGGAATCAAGAGAAGAGGTCTAAATTGGAATGTCATCAGATAATGCCCAACATGGATGGGACGTTAATGGGTTTTGTACCCTACAGGCGTGGTGGAGGCCTCGATGTGGGGGGACTTGGGTCTGTGTCGTTAACGTTGGGTCTTAGACATGGGGTTGAAGGGGCACAACACCACCAGCAACAACAATTACACCAGGAGGACCAGATTAGACGTCAATTTGGTGAGCATATGATCCATGACTTTGTGGGTTAA 2067 0.4427 MLYEPAFYSSEIASFSTPSNTLSPEGEEVKPSRLMLPHYASFYHSSVSEPPTSSSAGDQPRDNLGYDWMINYGSSSGVNETNYPNSNVATELNDNNLYVYQHLAKPSYHELIGRQLGEMQNHSSSSPATFFQNTLHDIVKYASISAQGSDHIVSEMQNPAHGIWKGNQNQTNSQGLSLSLSSNSHSKASLSGFPCNDGHASHEPYSRCDKSTKSVTKDCGKSLQDVVGVASSSSGYRSNVGPLGPFTGYATILKSSRFLKPAQELLDEFCNVCGSNGSDFSRVSGEASATNSAAEAVINNATESGVSAKKSVSNNAGAASCSILYNSKENSGDCESRGSFDCSSRSAHQQKKAKLLYMQEEVTRKHKQYHQQMQMVVSSFESVAGLSSATPYICMALKSVARHFRILKNAILDQIKHLKELLGEDFSGSTSGTITKLDTGGLAYLDQSFQKNKTAFLEPQQVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGMVGGNQNEGTTSGAEGSSQQAMVEETPLGKFGKHGDVIMPERQFQCLGMSSSSGGGNSEGVGFLMGSSEEWNQEKRSKLECHQIMPNMDGTLMGFVPYRRGGGLDVGGLGSVSLTLGLRHGVEGAQHHQQQQLHQEDQIRRQFGEHMIHDFVG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0222 688 Pfam Homeobox KN domain 480 519 IPR008422 GO:0003677|GO:0006355
Alju02g0222 688 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 164 550 - -
Alju02g0222 688 ProSiteProfiles 'Homeobox' domain profile. 460 523 IPR001356 GO:0003677
Alju02g0222 688 CDD homeodomain 463 524 IPR001356 GO:0003677
Alju02g0222 688 SMART HOX_1 463 527 IPR001356 GO:0003677
Alju02g0222 688 MobiDBLite consensus disorder prediction 535 554 - -
Alju02g0222 688 SMART prehox3 247 413 IPR006563 -
Alju02g0222 688 Pfam Associated with HOX 252 411 IPR006563 -
Alju02g0222 688 SUPERFAMILY Homeodomain-like 465 530 IPR009057 -
Alju02g0222 688 FunFam BEL1-like homeodomain protein 9 466 528 - -
Alju02g0222 688 Gene3D - 466 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0222 Alju-ChrAlju02 1700416 1705407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0222 253 655 Homeobox Transcription Factor Family AT4G34610 39.078 5.21e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju02g0222 POX 2.5e-39 No_clan