Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0220 ATGTCTCCTTTACAGAAATCCAATGTCGCTCTTGAAATTGACAATCAAGCTCTACCATCACACCACCTCTTCTATTATGTTGGAATAAACTGTGGAGGAGGTTCTCTCAAAAATGCCCTTTTTTTGTTCCTACGCCAACAATTTCAAGCCTCAAGTTTCCACTTTGGTCGAAGAAAGAAGCACCCATATGGTGTGAGTGGGTATGTCTCCATATTTCATCAAGCCACCACGCCGGTCACTCTTTTTCTCTATGCGAAGGGCGGCGGCGGCGTTACCTTCCTCCAAGACTCCAATGCTCACCCGGCAGTGACGGCTGAGCGCTGGCGGACGATGGCATGTAGTACACGTTTTAGTAGCAAGTCTAAGGCTGATGAAAATAATAATGCAAGGCGCTCAGACTCTTCTGCACCTGATGCAAATGATCTCAAAAGGTCTGCTGAAGTGTTTTCAATTCCTTCAGGAACTCGGAAGTCTGAGGAGGATATTTCACATAAATGCCAGACAGACTCCTTTACGTTTATGGAGTATTGGCTTCCTGTACAGATATCCCACGTGCAACTTGAACAGTATTGTTCTACTTTAGTTTCAAATGCTTCAGTTCTTCGGTCATCATCAAAAATTGATAGTGTTGGGGCGCTTCAAGACCTTCTTATTTCAACTCGGAAGTGTTGTAATCACCCTTATGTTGTTGATCCATATTTACAAACTCTGCTTACCGAAGGCCTCCAAGCGATTGAGTACGTGGATGTTGGAATAAAAGCAAGTGGCAAGCTGCAAGCTCTTGATTCAATGCTTATGGAGTTGAAAAAAAAAGGGTCTGAGGATAATGGTGTGTCTATAGGTGGTTCTGGGAAAGATTCCATAGGAGACATTTTGGATGATTTCTTGCATCAAAGATTTGGTTCAGATGCTTATGAGCGGGTTGACAAAGGGGTCTTGCATTCTAAGAAGCTTTCTGCCCTGAATCAGTTCAACAATAATGACAGTGGAAGATTCATTTTTTTATTAGAATCATGGGCTTGCGTTCCAAGCATCAAATTGTCATCAGGTGATACCATCATTATATTTAATAGTGATTGGAATCCAGTGAGTGATATAAGATCCCTTCAGAGGATAACACTTGATTCACAGTCTGAACAGATAAAACTTTTTCGTTTGTATTCATGTTTCACTGTTGAAGAAAAAACCCTAATTCTTGCTAAGCAAGGTAAGACACTTGATAGCAATTTGCTGAACATGAGCTGGAATATCAGTCATATGTTGTTGATGTGGGGTTCATCTTGTCTATTTGATAATTTGAGACTCATTCTTGATGGCAAAAGTTCTAGTTCATGTTCCAATAATTCATTTGAAGACCCTGGACGACTTTCCAAAGAAGTTCTCCATGAGTTCTCGTCCGTACTTTTGCAAGACAGTGGATATAATGATACAAGCAACTGTTCAATTATATTGAAAGTCCAGCTTAATGAAGGAACATACTGTACAGATTTTGCCTTGTTTGGTGAGAAAAAACTTGGATCTCCGGTTGAAGGATTACCCCATATGTTTTGGACTGAACTTTTAAAGGGAAAAATTCCTCAATGGAAACACTATAGTGGTCCATCTCAACGGAGTCGTCGAAGGGCTCATCATGCTGGTGAAAAGTCGTCCACTGGAAACGAGGAAGGTAATGAAGCTGAATATGAGAAAAGGAAATTGTGTGATGAGCAGAAGAGCTTACATCTCTTGCTGATGCCAGAGATAGCAAAGCTTTGTGAAGTTCTTCTTCTTCCAGATAATGTCACGACTGTGGTGGATAATTTTCTTGAGTACATTATGAACAATCACCACATGAGTAGGCAATCGGAGTCAATCTTGCAGGCTTTTCAATTATCTCCGTGTTGGACTGCAGCATCTTTGCTAAAGCACAAGATTAACCACAAAGTTTCCCTAATGCTTGCAAGAGAGCATTTAAAATTTGACTGTAGAAAGGAAGAGGCTGACTATGTGTATTCAATGTTACGATGTCTGAAGAAAATATTTTTATATCGTGCTGGAAATTCCAATGCCTTTGTCTTTTCTAAACCTTCTAAATCACCAAACAAGGTTTATTCCTCTACAGGAGTGGCACCTGAGGTTGAATTGGCTATGGAAGATATTGCCAAGAGTATTAAAGAAATTCAGAAGTCCGAAAAACTTAAGATTTTGGACAAAGAATTTGCTAAAGGAATTGAAGATTTGGAATGCCAAGATGAAATGCTCCTCAAGAATCTTGAAGCTATACAACTGGAAGCAAAGCAGGAATTCCAGCGTTGGGAGGCTGCTTGGACAGAAAAAGTGAAGGATTGGGCCCAAGATGAGTTGAAAATATTTCTTTCAAAGGAATTTGGGTCTGGGTTGAAATACTCCCAGACCAGTGACCAAGCTCAACCTCATGATGGTTCAAAGCATGCTGGCATTGTGTCTGATCATGTTGAAGGTCCCATTGCAGCTTCATATGGAGGATCAATATCTATAAATGATGGCCATAATAAAGCTGAAAGTGTATCTGAAAATATAGGGCCTGTTATATCTATGCTTTCTTATTCCAAAGAACATAATTCTAATGGAGCCGCTGATGGGGCATATGAATGTAACAATGATATAGTCAATTCAGTTCTACCTTCATCTGAAGGAAAGATGTGTAATGGGAAAACATTGGATGCTTCCATCCGAGAGGCGGCTGTATTGAGTAATCCTGATTGTGGTTTATCACTAGGAAGCAAGGCCAGTGGTTCTAGTGATGGTATGGCTGCCTCCTTAAATTCACAAGTATCTCCAGATCCTATCCCAAGTGCAACTGCTGTATGCATTCCAAATTGTGATAATGCTGTACAGATCCATGAGGCCAATGAAAACAGTGATTTAGATAGACTTGCCACTTTTAGTTTGCCCTTTTCTGAAGATATAAGAGCTGATGGGGCCACAGGAATTTTATTAGAAAGAGAAGTACCTGTCGAAACAATTGGGACTGTCTTTTTGACTGATTGTCCAAAAAATGCTATCCCTCCAAAGCCCCCTTCATCCGTAGAACAAAGATTTGATGAAGATCAAATGGAAGGAATTTCTAGAACCATCAATGAAGTCTCGGTGTCCCAGGAAACTCCAGTATCATGCTCACATTCAGAGCAACCTTTGGTGATCTCATCCCCTGTGGTTGCGGTGCCACAGGATTTATGTACCTCTGTATCTACGTCCAATAAATTTGCTGATGAAGATATAGAAGTTGAGTCACTTGCTGTAAAGACTACAGTGCAAGAGCAACAACTGCCATTTGCAAAGTTCCCTTTTAGCAATCAGGATGCTATTGAAAAAATGCAAAATGCTTGCTCACAAGTTGAGTCAGTGCCCACTTATTTTAGTACTGTGCCAGTTACTCAAGCTAACACTGATTCACTGCTCTTCAATTCTCTAGACCAAGTACAGAGATTACATTCTGAGGAATCCCCTTTGTCCAACCGAGATCTAGCTGAAGAAGTGCAGAACTTCTCCCAAGAAGATGAGGCGCTATCTAATTCTGTTGATGTTGTGCTGCCTAATCAATTAAATTGTGAATCATTAGTCATGGAGCCTTTAATGGAAGAGCTGCAGTTACCAACTTCAGAGTGCCCTTCTTCCAACCAGGACATAGTTGAAGAAATGCATAATCCTTCTTCACTAGATGGCCAAGTAATGGCCAATCTAGATCTGGTTAAGGGATTTCTACCCGTAGAGCACCCTTCTTCCAATAAAAATACAGTCGAAGAAATACAAAACTCTTCTCAACAAAATGGATCAGCATGTTGTCCGGTTGATTATACACCACATGCTCGAGCTAATAGTGAGACATTGGTCATGGAGCCTCTAGAGCATTCACAACAATTAGTGTCTGTAGAGTTGCCTTCTTCCAACTTGCATCTAGCTAATTTACCTTTGGCCCCTACAACTGAAGACCAATGCAGCAATGAAGTATCCAGTCCAGTTGATGATGTAACTATTCAATCTAATCCTTAG 4011 0.4061 MSPLQKSNVALEIDNQALPSHHLFYYVGINCGGGSLKNALFLFLRQQFQASSFHFGRRKKHPYGVSGYVSIFHQATTPVTLFLYAKGGGGVTFLQDSNAHPAVTAERWRTMACSTRFSSKSKADENNNARRSDSSAPDANDLKRSAEVFSIPSGTRKSEEDISHKCQTDSFTFMEYWLPVQISHVQLEQYCSTLVSNASVLRSSSKIDSVGALQDLLISTRKCCNHPYVVDPYLQTLLTEGLQAIEYVDVGIKASGKLQALDSMLMELKKKGSEDNGVSIGGSGKDSIGDILDDFLHQRFGSDAYERVDKGVLHSKKLSALNQFNNNDSGRFIFLLESWACVPSIKLSSGDTIIIFNSDWNPVSDIRSLQRITLDSQSEQIKLFRLYSCFTVEEKTLILAKQGKTLDSNLLNMSWNISHMLLMWGSSCLFDNLRLILDGKSSSSCSNNSFEDPGRLSKEVLHEFSSVLLQDSGYNDTSNCSIILKVQLNEGTYCTDFALFGEKKLGSPVEGLPHMFWTELLKGKIPQWKHYSGPSQRSRRRAHHAGEKSSTGNEEGNEAEYEKRKLCDEQKSLHLLLMPEIAKLCEVLLLPDNVTTVVDNFLEYIMNNHHMSRQSESILQAFQLSPCWTAASLLKHKINHKVSLMLAREHLKFDCRKEEADYVYSMLRCLKKIFLYRAGNSNAFVFSKPSKSPNKVYSSTGVAPEVELAMEDIAKSIKEIQKSEKLKILDKEFAKGIEDLECQDEMLLKNLEAIQLEAKQEFQRWEAAWTEKVKDWAQDELKIFLSKEFGSGLKYSQTSDQAQPHDGSKHAGIVSDHVEGPIAASYGGSISINDGHNKAESVSENIGPVISMLSYSKEHNSNGAADGAYECNNDIVNSVLPSSEGKMCNGKTLDASIREAAVLSNPDCGLSLGSKASGSSDGMAASLNSQVSPDPIPSATAVCIPNCDNAVQIHEANENSDLDRLATFSLPFSEDIRADGATGILLEREVPVETIGTVFLTDCPKNAIPPKPPSSVEQRFDEDQMEGISRTINEVSVSQETPVSCSHSEQPLVISSPVVAVPQDLCTSVSTSNKFADEDIEVESLAVKTTVQEQQLPFAKFPFSNQDAIEKMQNACSQVESVPTYFSTVPVTQANTDSLLFNSLDQVQRLHSEESPLSNRDLAEEVQNFSQEDEALSNSVDVVLPNQLNCESLVMEPLMEELQLPTSECPSSNQDIVEEMHNPSSLDGQVMANLDLVKGFLPVEHPSSNKNTVEEIQNSSQQNGSACCPVDYTPHARANSETLVMEPLEHSQQLVSVELPSSNLHLANLPLAPTTEDQCSNEVSSPVDDVTIQSNP 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0220 1336 MobiDBLite consensus disorder prediction 123 140 - -
Alju02g0220 1336 MobiDBLite consensus disorder prediction 1248 1268 - -
Alju02g0220 1336 Coils Coil 737 768 - -
Alju02g0220 1336 Gene3D - 171 407 IPR027417 -
Alju02g0220 1336 PANTHER HELICASE PROTEIN MOM1 723 1329 IPR039322 GO:0031507
Alju02g0220 1336 MobiDBLite consensus disorder prediction 1315 1336 - -
Alju02g0220 1336 MobiDBLite consensus disorder prediction 545 559 - -
Alju02g0220 1336 MobiDBLite consensus disorder prediction 529 559 - -
Alju02g0220 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 413 IPR027417 -
Alju02g0220 1336 MobiDBLite consensus disorder prediction 119 140 - -
Alju02g0220 1336 MobiDBLite consensus disorder prediction 1248 1272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0220 Alju-ChrAlju02 1662742 1678099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0220 307 406 RAD5 or RAD16-like Gene Family AT5G05130 24.752 7.33e-06 48.5