LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0214	ATGAAGCTGCAATTCAAAGTTGCCCTTGCTTTTGTTATTAGCTTGATCTGGATTCAGTCCTCATTCTGTGGAGGACCTTCTGGGAGTCTAAACAAATGGATATGTAGATGTTCTTTTCAGGGGAACCAGAGTTCCTCTCTTGTTAACTGTTCTACATCATGTGATTGCCGTCTAGATGCCAAAGAGAGTGAATCCTTATGGACATGCTTATGTGACCCCAACGGTTTTCCTAATGTGGAGGCAGATGGTCATAGTTCAAATTGCTTTACTGCCTGCAACTGCACCTGGGGAGCTCTCATCATCTCACAAGGTTTAAAGAAACACATTTCCAGCAAGATCGTCATAATTATACTATTACTATGTGTTGTATGCACAACTGTTGCATTTCTTGCCTCAATCATATGCTATGCATACCAAAGGGACAAGTGTCCTATTCAATCACCCGTATTCTCATCAGACAACGAAACAAGTTACAATAGCACTGCCATCTTAATTAGTAATAGAACTTCAGTGCCAGAAACAAAAGCTACTACAAATTCTCCTATTAATCTGATCTCAGGGTGTTTTCAGATGGCCTCTTTCTTGTGTGGGAGCAAAGGAGAAACTTTTCATGGAAATATTATTCAATTTTCATTTGCTGTACTAGAAAACGCCACTGAAAAATTTTCAGCTTTCAACCTGATTGGACTGGGCCGAAGTAGTTATGTATATCGTGGTAGACTGAAGAGTGGTATTAATGTGGCAGTGAAGCGACTAAAAGCTCAAGGGAGGACTGAAGCAGACTCTGACTTTTTGACAGAGATTGAACTACTATCTAGACTTCATTGTCACCTGGTGCCTTTGATTGGGTACTGCTTAGAATCAAAAGGAAAACATGTTGAGAGGTTACTTGTATTGAAGTACATGGCCAATGGTAATTTGAGGGACTGTTTGGATGCAGTTTCTGGGAAAAGTCCGGATTGGGCTACACGTGTTACAGTGGCAATGGGAGCTGCAAGGGGATTGGAATACCTACATGAAGCAGCTGCTCCAAGAATTATGCATAGAGATGTTAAATCAACAAACATTCTTCTGGATGAAAATTATCAAGCCAAAATTACCGATCTTGGTATGGCTAAAAACTTGAGAACTGATGACTTCCCCAGCTGTTCAAATTCTCCAGCTAGAATGCAGGGCACATTTGGTTATTTTGCTCCTGAGTATGCAATTGTTGGAAGAGCCTCTCTTAAGTCAGACATCTTCAGTTTTGGGGTGGTTCTTCTTGAGATTATCAGTGGTCGTCAACCTATCTATAAATCTAAAGGCAAAGAAGAAAGCCTTGTCATATGGGCTGCTTCTCTCTTACAAGATAAAAGACGCATATTAACCGAGTTAGCTGACCCACAATTAAAAGGAAACTTCCCGGAAAAAGAGATTCAGATAATGGCATATTTAGCAAAGGAGTGTTTGCTGTTGGATCCTGACACTCGACCAACCATGAGTGAAATCGTTCAGATTCTTTCAACTATATCGCCAGACAAATCTAAAAAGACAAGAAACATTCCATTGAACCTTTTCCAGGAACCAAGGAATTCAGAGAAGCTAAAGCAAGTTCCATCTAGCAGAGTAGATATTGACCACAATCTTTGGGTGGGAAATTTCAATAATGAAGCAGATATAGTTTCTGCCAAGTATATGGATAGTTTGGTCCTCGTGACTTCAAAAGCTGAGAGCTGGTATGGATTAGAGGAAGAAATTGTTGACCTAACTGAGCCTCGGTATGAATCATTTTGCATGACAAACGTTAGTTCATCCTTATAA	1800	0.4017	MKLQFKVALAFVISLIWIQSSFCGGPSGSLNKWICRCSFQGNQSSSLVNCSTSCDCRLDAKESESLWTCLCDPNGFPNVEADGHSSNCFTACNCTWGALIISQGLKKHISSKIVIIILLLCVVCTTVAFLASIICYAYQRDKCPIQSPVFSSDNETSYNSTAILISNRTSVPETKATTNSPINLISGCFQMASFLCGSKGETFHGNIIQFSFAVLENATEKFSAFNLIGLGRSSYVYRGRLKSGINVAVKRLKAQGRTEADSDFLTEIELLSRLHCHLVPLIGYCLESKGKHVERLLVLKYMANGNLRDCLDAVSGKSPDWATRVTVAMGAARGLEYLHEAAAPRIMHRDVKSTNILLDENYQAKITDLGMAKNLRTDDFPSCSNSPARMQGTFGYFAPEYAIVGRASLKSDIFSFGVVLLEIISGRQPIYKSKGKEESLVIWAASLLQDKRRILTELADPQLKGNFPEKEIQIMAYLAKECLLLDPDTRPTMSEIVQILSTISPDKSKKTRNIPLNLFQEPRNSEKLKQVPSSRVDIDHNLWVGNFNNEADIVSAKYMDSLVLVTSKAESWYGLEEEIVDLTEPRYESFCMTNVSSSL	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0214	599	Gene3D	Phosphorylase Kinase; domain 1	197	301	-	-
	Alju02g0214	599	FunFam	receptor-like serine/threonine-protein kinase NCRK	302	512	-	-
	Alju02g0214	599	ProSiteProfiles	Protein kinase domain profile.	222	503	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0214	599	CDD	STKc_IRAK	228	500	-	-
	Alju02g0214	599	SUPERFAMILY	Protein kinase-like (PK-like)	203	500	IPR011009	-
	Alju02g0214	599	SMART	serkin_6	222	503	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0214	599	FunFam	receptor-like serine/threonine-protein kinase NCRK	196	301	-	-
	Alju02g0214	599	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	346	358	IPR008271	GO:0004672\|GO:0006468
	Alju02g0214	599	ProSitePatterns	Protein kinases ATP-binding region signature.	228	250	IPR017441	GO:0005524
	Alju02g0214	599	Gene3D	Transferase(Phosphotransferase) domain 1	302	521	-	-
	Alju02g0214	599	PANTHER	OS01G0750732 PROTEIN	68	510	-	-
	Alju02g0214	599	Pfam	Protein kinase domain	225	498	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0214	Alju-ChrAlju02	1632790	1636461	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0214	1	599	Receptor kinase-like Gene Family	AT2G28250	53.871	0.0	575

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XVI	Alju02g0214		Pkinase	4.1e-41	CL0016