Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0206 ATGTCAGAGGACATTACAAACATGAAGGATAATTTGTTTTTGGACAAGAGTTTCAATGGTCTATCGGATGAAATCTTTGATGATGTCATAAAGTTCTTTGATTTTCCGCTGGAAGATGTGGATGCCAACATTGCGGAAGAAGAAGACTGGGATGCCCAATTTAAACGCATCGAAGAGCCATCTTTTGATGTGTTCTCAGTATCATCGTCTGAATTGTGCGGTAAAACTCAAAATGACAACTTACACCTTGGGAGGACTTTCTCTGCTTGTAATAAGGAGACTTCAGCCCCAGTTGCTAAGCCTAACGTCTACCTCAATAAAAAGAATCAGCCCCAGTTTAGAACCTACAGCCCAGTTTCTGTATTTGAAAGCACTACATCGTCCTCTGGTGAAAGTTCCAACTTTGAACTGCCCATCATCCCGGGGAAGCGCCCTCGAGGGAGGCGCCGGCGTCTCTCCAGCTTCACCTCTCTATTGCCAATCCAGTTGGCACTGCGAAAATCTCAAAAGGGAGCTGCCGCAGGAGAGCTATTAAAATGGGTGAAAAGGAAGCAGAGGAAGAAGGATCTCTCCATTCTCTCAAGTGAAGTCAAGATGAAGAAATCATCATCAGGCGATTCAGGTGCGCCTAGAAAATGCATGCATTGTGAAGCGACCAAGACCCCACAGTGGAGGGAGGGACCTATGGGTCCGAAGACTCTGTGTAATGCATGTGGGGTTCGATACAGGTCAGGTCGCTTGTTCCCCGAATACCGCCCTGCGGCTAGTCCCACTTTTGTACCATCTCTGCATTCCAACTCTCACAAGAAGGTCATAGAGATGAGAAACTCGGTCATGCAAGAGTCTAGGGCTTCTATTTTGGGTTTGTCATCGATCTAA 879 0.4642 MSEDITNMKDNLFLDKSFNGLSDEIFDDVIKFFDFPLEDVDANIAEEEDWDAQFKRIEEPSFDVFSVSSSELCGKTQNDNLHLGRTFSACNKETSAPVAKPNVYLNKKNQPQFRTYSPVSVFESTTSSSGESSNFELPIIPGKRPRGRRRRLSSFTSLLPIQLALRKSQKGAAAGELLKWVKRKQRKKDLSILSSEVKMKKSSSGDSGAPRKCMHCEATKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVPSLHSNSHKKVIEMRNSVMQESRASILGLSSI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0206 292 FunFam GATA transcription factor 202 286 - -
Alju02g0206 292 CDD ZnF_GATA 212 259 IPR000679 GO:0006355|GO:0043565
Alju02g0206 292 Gene3D - 203 285 IPR013088 GO:0006355|GO:0008270
Alju02g0206 292 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 209 270 - -
Alju02g0206 292 SMART GATA_3 207 257 IPR000679 GO:0006355|GO:0043565
Alju02g0206 292 Pfam GATA zinc finger 213 246 IPR000679 GO:0006355|GO:0043565
Alju02g0206 292 PANTHER GATA TRANSCRIPTION FACTOR 42 278 - -
Alju02g0206 292 ProSitePatterns GATA-type zinc finger domain. 213 238 IPR000679 GO:0006355|GO:0043565
Alju02g0206 292 ProSiteProfiles GATA-type zinc finger domain profile. 207 243 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0206 Alju-ChrAlju02 1582545 1585948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0206 18 275 C2C2-Gata Transcription Factor Family AT1G08010 38.989 4.73e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju02g0206 GATA 5.2e-16 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0206 02 1582545 1585948 Alju02g0206 02 1582545 1585948 ECH