LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0182	ATGCAAAAGGTCAACGAAGAATCGGTGGAAGGTTGGGGGCTAATCCTGCAAGGATCAGCCAAGAACGTAGTTATTAGATTTTCAAATAATAAAGTTTGTTCAGCTGAGAATACGGCAACGGCATATAGTTCTAACCACCAGATTTTCAACAGGAGTTTTTCTTTTGCTAAGATGGATTGTTGTAACTGCTTCTGGTTCATCCGAAAATCTAAACAGCCCAATGCTAAGTTTGGTATCAATAATAATCTCTCTCAGGAGCTGTTGTTGGATGAAGACATCGAAGATGATGGCTCATATGATGGTGATGTTACTAACATCAGCAGTGGAGATGATAGAGAAGTACAAATTCATGCCAACCGGTCTGAGGATATTTTGAAATGGAGAGCAGAGAATGACATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTGGCACAGAGGATGAAAATGGAAACAAGATGATCAATGAGTATGTTCGTGAATATAAGATAGGTTCTGGTAGCTATGGGAAAGTGGTTTTATATCAAAGTTCTGTTGATGGCAAGCACTATGCAATCAAGGTTTTTCACAAGTCTCATTTACTGAAGGTTCGAGTCGCAGCCTCAGAGACTGCCATGACAGATGTTCTGCGCGAGGTACTTATCATGAAAACAGTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCACTTTTACATGGTACTTGAATATGTGGAAGGCAAATGGGTCTGTGAGGGTACAGGAACTATTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATATTTGCGTGACATTGTTTCAGGATTAATGTATCTTCATGATCATAATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTCGCCATGGGATGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGATAATGATGAACTTCGCCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCGTGGTAGAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATCCTGGGTGAATATCCTTTTCTAGGTGATACTCTTCCAGATACTTACGATAAAATAGTCAATAACCCTTTAGTCCTCCCAGATAATTTGAACCTGCAATTGAAGAACTTGCTAGAAGGACTACTTTGCAAAGATCCAGAACTAAGGTTGACATTAGGTGATGTTGCAAAGCATAGCTGGGTTATAGGAGACGATGGGCCAATTCCTGAGTACTTGTGTTGGTGTAAACGCAAGAGCTTGGAGAGGGAAGACTTAGATGGGAGCAACATATTTGCTTGA	1362	0.4134	MQKVNEESVEGWGLILQGSAKNVVIRFSNNKVCSAENTATAYSSNHQIFNRSFSFAKMDCCNCFWFIRKSKQPNAKFGINNNLSQELLLDEDIEDDGSYDGDVTNISSGDDREVQIHANRSEDILKWRAENDMICRQFPVKETHKVVGTEDENGNKMINEYVREYKIGSGSYGKVVLYQSSVDGKHYAIKVFHKSHLLKVRVAASETAMTDVLREVLIMKTVEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGTICGLGEETARRYLRDIVSGLMYLHDHNIVHGDIKPDNLLVTRHGMVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYRGRAADTWAVGVTLYCMILGEYPFLGDTLPDTYDKIVNNPLVLPDNLNLQLKNLLEGLLCKDPELRLTLGDVAKHSWVIGDDGPIPEYLCWCKRKSLEREDLDGSNIFA	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0182	453	PANTHER	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	119	424	-	-
	Alju02g0182	453	Pfam	Protein kinase domain	161	422	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0182	453	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	288	300	IPR008271	GO:0004672\|GO:0006468
	Alju02g0182	453	Gene3D	Phosphorylase Kinase; domain 1	155	258	-	-
	Alju02g0182	453	ProSitePatterns	Protein kinases ATP-binding region signature.	167	190	IPR017441	GO:0005524
	Alju02g0182	453	FunFam	Serine/threonine-protein kinase GRIK2	151	451	-	-
	Alju02g0182	453	Gene3D	Transferase(Phosphotransferase) domain 1	262	428	-	-
	Alju02g0182	453	FunFam	Serine/threonine-protein kinase Ssp1	155	257	-	-
	Alju02g0182	453	ProSiteProfiles	Protein kinase domain profile.	161	422	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0182	453	SUPERFAMILY	Protein kinase-like (PK-like)	157	434	IPR011009	-
	Alju02g0182	453	SMART	serkin_6	161	422	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0182	453	CDD	STKc_LKB1_CaMKK	167	422	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0182	Alju-ChrAlju02	1468230	1472524	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0182	156	429	CBL-interacting serine-threonine protein kinases	AT4G24400	32.117	7.01e-43	154

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-LKB	Alju02g0182		Pkinase	1.7e-56	CL0016