Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0173 ATGGAAGGAGAATACCAAACTGGGTCTATGTTTCCCCCTGGATTCAGGTTCCATCCTTCTGATCAAGAACTCATAATTCATTACTTAAAAAATAAAATAACCTCTCGCCCACTTCCAGCATTGATTATTGCAGAAATTGATCTGTACAAGTATAACCCATGGGAGTTACCCAAAAAGGCATTGTTTGGGGAGGATGAATGGTATTTCTTTAGCCCCAGAGACCGAAAGTACCCAAATGGATTGAGACCAAACAGAGCAGCAGCTTCAGGATATTGGAAGGCCACTGGTACAGACAGGCCTATACTTAGCTCTTGCGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTTTTTTACACAGGTCGCCCTCCCAGAGGGGCTAAGACTGATTGGATTATGAATGAATACAGATTGGTTGACACAACCAACAAACCTTCCAGGTTTAAAGGTTCCATGCGACTGGATGACTGGGTGCTATGTCGGGTTCGACACAAAGGCTACTCATCAAGGAATTCAGGTGAGAATCAGGAGCATCATTTTGGACCAAGTTTACAGGCAAACCTTGCCTGCTGCGACCAATTCCAAGGAAACACAGACCTTGGAGCTAACATGTTCACAAATTATCAGTACAAAGACTATCGAATCTTAGCCTCTATTCTCGTTGGCGAACCTGTACTTCCCATAGAGAACAAGTCAAGTGTGAGCTTTAAAGGCAGCAAAGGCGACAGCCTCAGTTCAGTGTACAGCTACTTCGACATCTTGAATACAAAATCTAATGAAGATAATCAATACGACAATCTCATTTCTTTTAATAGGGAGTTTCACTTTGAGAACAAAATAGATCATTTTACTAGCAAGGTGTTGACGAGTAGTGACATGTACTGCTACAGTCGAAATCAGTCTCAAGATGGCATCCTCAACGAGACTCCACCAGATCCTGCCATCAATTTTGAAGAACTTAACAAATTGGCCTCCACAGAGAGACACTCACCGGAAATAGGATTGCCTTTCAGGGTGCAGACAAGTTGTTATTCTACGTTTCCTTGTTCATAG 1053 0.4283 MEGEYQTGSMFPPGFRFHPSDQELIIHYLKNKITSRPLPALIIAEIDLYKYNPWELPKKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDRPILSSCGSKRIGVKKALVFYTGRPPRGAKTDWIMNEYRLVDTTNKPSRFKGSMRLDDWVLCRVRHKGYSSRNSGENQEHHFGPSLQANLACCDQFQGNTDLGANMFTNYQYKDYRILASILVGEPVLPIENKSSVSFKGSKGDSLSSVYSYFDILNTKSNEDNQYDNLISFNREFHFENKIDHFTSKVLTSSDMYCYSRNQSQDGILNETPPDPAINFEELNKLASTERHSPEIGLPFRVQTSCYSTFPCS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0173 350 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Alju02g0173 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 258 - -
Alju02g0173 350 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Alju02g0173 350 FunFam NAC domain-containing protein 72-like 20 170 - -
Alju02g0173 350 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Alju02g0173 350 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0173 Alju-ChrAlju02 1425805 1427534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0173 11 174 NAC Transcription Factor Family AT1G61110 67.442 4.47e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g0173 NAM 1.2e-37 No_clan