Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0163 ATGTATTATGTGCCCTCACTCCTAAGAAAGCACTTGTTATTTTTGAAGAAAAGTTTTGTAGTCTGTTGGATTTCTTCCAGCCACTCGTATTATTTAGTTTTTAAAATGTTGAGGCTAAAATTGGATGATGGTCGTCAGCTCCATCGCTGGAGACATACATCCTTCGCTCTTTCCCTTTATATCCAATGTTACAATTTCATGCAGCACACTGGATATTTGCCTTTAATTGGTTCTGCAATCATCAAATGTGACCATACTGAACACAGAAGCAAGTCACATACCAGGAGAGTGATGTATTTCACTGAATCGATTATGACTTTTCGGGATGACTTGGGTCCAAGAAAGCTGGAGTCTGAGAACGACACTGACGCAAACATCGGTCTTTCACAATCTCCCACCAATTCCTCCTCTGCTTCCCTTCCCACCCCACAAGTCATCGCAAGCCCTTGTGCTGCCTGCAAGATTCTCCGGCGCCGATGCGCCGACAAATGCGTTTTAGCTCCCTATTTCCCTCCCACCGACCCCGCCAAGTTCACCATCGCCCACCGTGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGATCTGCCGGAGAATCAGAGAGCTGATGCAGTGAGCAGTATGGTGTACGAGGCAAGTGCAAGAATCAGAGACCCCATATATGGCTGTGCTGGTGCCATTTGCCAGCTTCAGAAGCAAGTGAATGAGCTTCAAGCACAGCTTGCCAAGGCACAAGCAGAGCTCGTCAACATGCAATTACAGCAAACCAATCTGGTGGCTCTCATTTGCATGGAAATGTCTCAGACGTCTTTCACTCCTCAGCAATCTGAATCGCCACAGCATTCTGTTGACGAGTTCATTTCAACTCCTCCACACACCAACGCCTATCAGAGCAATCTCAACTTCTTCGACGACAACACTAGCTTTAACTCACTCTGGGAGCCTCTCTGGACATGA 960 0.4708 MYYVPSLLRKHLLFLKKSFVVCWISSSHSYYLVFKMLRLKLDDGRQLHRWRHTSFALSLYIQCYNFMQHTGYLPLIGSAIIKCDHTEHRSKSHTRRVMYFTESIMTFRDDLGPRKLESENDTDANIGLSQSPTNSSSASLPTPQVIASPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQDLPENQRADAVSSMVYEASARIRDPIYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQTNLVALICMEMSQTSFTPQQSESPQHSVDEFISTPPHTNAYQSNLNFFDDNTSFNSLWEPLWT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0163 319 Coils Coil 228 255 - -
Alju02g0163 319 ProSiteProfiles LOB domain profile. 148 249 IPR004883 -
Alju02g0163 319 MobiDBLite consensus disorder prediction 122 142 - -
Alju02g0163 319 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 148 279 - -
Alju02g0163 319 Pfam Lateral organ boundaries (LOB) domain 149 246 IPR004883 -
Alju02g0163 319 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0163 Alju-ChrAlju02 1354915 1360012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0163 145 319 AS2 family AT2G28500 65.591 3.35e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju02g0163 LOB 7.9e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0163 02 1354915 1360012 Alju10g0252 10 1986427 1987478 CCT
Alju02g0163 02 1354915 1360012 Alju02g0163 02 1354915 1360012 ECH