Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0156 ATGGTTGCCTGCAAAATGGCACAGTTCATTGATAACATTCCGTCAATGGATCTGATGCGCTCGGAGAAGATGACCTTTGCTCAACTCATCATCCCTGTCGAGTCCGCTCACCGGGCCGTCTCTTATTTGGGCGAACTTGGCCTCTTCCAATTCAGAGATTTAAATGATGATAAAAGCCCTTTCCAGAGAACATTTGTTAATCAGGTCAAGCGATGTGCAGAAATGTCAAGAAAGTTACAATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTTATGTCTTCTCCTCATTCTGTTTTGCAACCAGATGTTGAGTTGGAGGAATTAGAGTATCAACTTGCTGAGCACGAACATGAGCTAATTGAAATGAACTCTAACAGCGAGAAACTTCGTCAATCATATAATGAGCTCCTGGAGTTTAAGATCGTTTTGCAGAAGGCATTTGGTTTTCTGGCCTCAAATCATAGCCATGAATTTTCAGAGAGGGAGCTGGAGGAGAATGTATACTCAAATGACGGTTATTTTGACACAGGATCTCCACTTGAGAAGGAATTGAAGCCTGGATCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATGATCTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGAGCTACAAGAGGCAATATGCTTTTCAATCAGGCTGCAGCTGATGAACTAATAGAGGATCCTGTATCAAATGAGAAGATAGAAAAAACAGTGTTTGTCGTGTTTTTCTCTGGGGAGCAGGCAAGAACAAAGATTCTTAAAATCTGCGAGTCATTTGGTGCAAATTGCTACCCTGTCCCTGAAGATATAAGTAAACAAAGACAAATAAGTAGGGAGGTCTCAACACGCCTTTCTGACTTGGAGATGACTCTGGATGCTGGGATTAGGCACCGGAATAAGGCCCTTGCTTCTGTAGAAGGTCATCTAGCTAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACCAAAAAATGCCTCGTTGGAGAGGGTTGGTGCCCTGTATTTGCAAAATCGCAGATTCAGGAGGCACTGCAGCGTGCAACTTTAGATAGCAGCTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAGTCACCACCCACATATTTCAGGACCAACCGCTTTACAAGTGCATATCAGGAAATTGTTGATGCATATGGCGTTGCAAGATACGAAGAAGCAAATCCTGCAGTTTACACGGTTATTACATTCCCGTTTCTTTTTGCGGTAATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGTTGGGGGCATTGGTTCTTATAGCACGTGAAAGCAGGCTCAGCAAGCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGTTATGTGCTCCTTTTGATGTCACTGTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCAATTTCACATTTTTGGAAAGTCTGCTTACTCATGCCGAGATACTTCGTGCAGGGATGCACACACTGCTGGCTTAGTCAAATTACGAGATCCATATCCATTTGGCGTGGACCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTCAACTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCGCATTATTTTGGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACACATGATTTTTCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTCGTTAAGTGGTGCAATGGTTCTCAGGCAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGTGAGAACCAGTTGTTCAGGGGCCAAAGGCTACTTCAAATTGTGTTATTGCTTTTGGCTTTAATCGCAGTTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTCAAGAAGCTTCACCACGAGAGATTTCAAGGACGCACTTATGGTATGCTAACTACCTCTGAGATGGATCTCGAGGAAGAGCCAGATTCTGCCAGGCAACATGATGAGGAATTCAACTTCAGTGAGGTCTTTGTTCATCAAATGATCCACTCTATTGAATTTGTTCTAGGCGCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACTGTGTTTTATGAGAAAGTACTACTTCTTGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGGCTAGCTGTTTTTGCCTTCGCAACCGCCTTTATTCTTCTCATGATGGAAACCCTCAGCGCTTTTCTTCATGCCCTGCGTCTCCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCGTTAACAGAGGACGATGATTGA 2472 0.426 MVACKMAQFIDNIPSMDLMRSEKMTFAQLIIPVESAHRAVSYLGELGLFQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLQFFKDQISKAGLMSSPHSVLQPDVELEELEYQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKAFGFLASNHSHEFSERELEENVYSNDGYFDTGSPLEKELKPGSSYQSGLRFISGMICKSKVLRFERMLFRATRGNMLFNQAAADELIEDPVSNEKIEKTVFVVFFSGEQARTKILKICESFGANCYPVPEDISKQRQISREVSTRLSDLEMTLDAGIRHRNKALASVEGHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKSQIQEALQRATLDSSSQVGIIFHPMDAVESPPTYFRTNRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSKQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVQFHIFGKSAYSCRDTSCRDAHTAGLVKLRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNAHYFGSSVDIRYQFVPHMIFLNSLFGYLSLLIVVKWCNGSQADLYHVMIYMFLSPTDNLGENQLFRGQRLLQIVLLLLALIAVPWMLFPKPFILKKLHHERFQGRTYGMLTTSEMDLEEEPDSARQHDEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0156 823 PIRSF ATP6V0A1 14 823 IPR026028 GO:0000220|GO:0046961
Alju02g0156 823 Coils Coil 105 132 - -
Alju02g0156 823 PANTHER VACUOLAR PROTON ATPASES 18 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Alju02g0156 823 Pfam V-type ATPase 116kDa subunit family 42 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0156 Alju-ChrAlju02 1318370 1326252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0156 6 816 Primary Pumps ATPases(2) AT2G28520 78.405 0.0 1323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0156 02 1318370 1326252 Alju10g0245 10 1907676 1916198 CCT
Alju02g0156 02 1318370 1326252 Alju02g0156 02 1318370 1326252 ECH