Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0149 ATGTTCGATCTTAATCTGAATGCCGATTCGACAGATACCGCTAATAACCATGAATCCATTAAGTTCTCCGACGAGCTAACGGAAGCCTCCGGTAATCAAATGGCGAAATCGGGGACTTCCAATTCCTCTAATGTCTATGCCGACGGGTCCGGCAATGGAGGAGATGAGGACTCCTGCTCTACACGCGGTGGGGACATCTTCACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGTGAAAGATGCCGCAAACAAGGAATTATTTCTGTCTAGTGAAACTAAAGGAGTGGACGGCGAGTCCGCGAATTGGCAGGGTCAGTTTTTGTCTGCCCTTCCATCGAGAAAGAGCTGGATGAGTCTTTCCTTTGATCATCAGGGTGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGAAACAACCTCCTCAGCAGCAAGTGAAGAAAAGCAGACGGGGTCCAAGGTCTCGGAGCTCGCAGTTCAGAGGGGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGGTTTGATACCGCTCATGCTGCTGCCAGAGCCTACGACCGTGCTGCTATTAAGTTTAGGGGAGTCGATGCTGACATCAATTTCAATCTCAATGATTACGTGGAGGATCTTAAGCAGATGAAAAATCTCAGCAAAGAGGAATTCGTGCACATACTTCGTCGCCAGAGTTCTGGTTTCTCAAGGGGGAGCTCAAAATACCGAGGAGTAACACTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCGGCTATCAAATGCAACGGAAGGGAGGCAATGACCAACTTTGAATTAAGAACATACGACGGAGAGATGAAGCCTGAGGTCACTACTGAAGGTGGCGGTCGCAATCTTGACCTCAGCTTGGGCATAGCAACACCAGGCGGTGGGCCGGTAGAAAATAGGGGCTATCAGTTACAACCTATCTCTTACAACATGCATGCCGGAAGAAGTTCAAGGAAGGAGATCATCAATATTGATTCAGTAAATGGTGATCCATCTTTGAAAAGGCCAGTTGTTACTGAGGAGCGTCCTTTTGTATGGAATGGTATCTATCCTAGTTTCTTTCCCAATGAGGAAAGGGTTGAGAGAATCGGGAGAGATCATTCACAAGGACTGCCTCAATGGGGTTGGCAAACGCAAGGCCAGGTTACTGCTACGCCGGTACCCCTGTTCTCTGCTGCAGCATCATCAGGATTCTCAATTTCAGCTACCTTTCCTTTGGCCACCATCTTTCCATCAAAATCTCTGGGTTTGAGCTCAATTCCCCATGATATCTGTTTTGATCCGTCTGGCAGCAACACAACTCGACATTGCCAGACCAAGGCCCCGCATGCACCCCCCTAA 1476 0.481 MFDLNLNADSTDTANNHESIKFSDELTEASGNQMAKSGTSNSSNVYADGSGNGGDEDSCSTRGGDIFTFNFDILKEEGVKDAANKELFLSSETKGVDGESANWQGQFLSALPSRKSWMSLSFDHQGGNGEMKMVQVQKQPPQQQVKKSRRGPRSRSSQFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYVEDLKQMKNLSKEEFVHILRRQSSGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAMTNFELRTYDGEMKPEVTTEGGGRNLDLSLGIATPGGGPVENRGYQLQPISYNMHAGRSSRKEIINIDSVNGDPSLKRPVVTEERPFVWNGIYPSFFPNEERVERIGRDHSQGLPQWGWQTQGQVTATPVPLFSAAASSGFSISATFPLATIFPSKSLGLSSIPHDICFDPSGSNTTRHCQTKAPHAPP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0149 491 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Alju02g0149 491 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
Alju02g0149 491 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g0149 491 MobiDBLite consensus disorder prediction 1 17 - -
Alju02g0149 491 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 MobiDBLite consensus disorder prediction 28 58 - -
Alju02g0149 491 MobiDBLite consensus disorder prediction 137 158 - -
Alju02g0149 491 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Alju02g0149 491 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 MobiDBLite consensus disorder prediction 28 57 - -
Alju02g0149 491 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
Alju02g0149 491 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 340 - -
Alju02g0149 491 CDD AP2 249 307 IPR001471 GO:0003700|GO:0006355
Alju02g0149 491 Gene3D AP2/ERF domain 249 309 IPR036955 GO:0003700|GO:0006355
Alju02g0149 491 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0149 Alju-ChrAlju02 1260838 1264411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0149 105 333 AP2-EREBP Transcription Factor Family AT4G36920 71.308 4.27e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju02g0149 AP2 2.9e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0149 02 1260838 1264411 Alju10g0240 10 1858402 1862053 CCT
Alju02g0149 02 1260838 1264411 Alju02g0149 02 1260838 1264411 ECH