Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0143 ATGTGGAAGTGCGATACGCGTAGGCAGGATGGGCCCTACTCGCGGCGTCATCGCGTGGGTCCGATCCTCGACACTCGCTTGCTTCCGTGTTTACACGCTCTAGTCTCTGTTCTAGGCTCCGTTTTCTTGGTGTACCTAAGACTGAGAGGGATTATGGGTTGCTTTTGTTTTGCAAAGAAATCAAGCGGAAAATCGCAGGCCAACAACTATAGCCAGAGCGCAAAGCCGAACAATCACACAGATACGGCGAAAGTTGATTTGAATGTGAATGGGAAGAAGGAAGCTCATTCTAAAGATAATCAACTTTCTCTGGACGCGAAGAGATTGAATTTAACGGACAATGGAGACACTAGTGGTAGCACGGCGCAGACTTTTACTTTTGATGAACTTGCAGCAGCGACAGGAAATTTTAGGTCAGATTGCTTTCTGGGAGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCATTTGCAGAGAATAGATCAGGTTGTGGCTATAAAGCAACTTGATCCTAATGGACTTCAAGGAGTTCGAGAATTTGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTAATTGGGTATTGTACTGATGGAGATCAGAGACTATTGGTTTATGAGTACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACGTGGTCGAAAACCACTTGATTGGAACACGAGAATGAAAATAGCAGCTGGAGCTGCCAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCTGTCATATACCGTGATTTGAAATGCTCAAACATTTTATTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCCAAAGTGGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACATATGGTTACTGCGCTCCAGATTATGCAATGACGGGTCAGTTGACGTTCAAGTCAGATATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACTGGAAGGAAAGCCATTGATAATACTAGACCTGCCAAGGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGAAAATTCTCCCAAATGGTAGACCCATTGCTTGAAGGCCATTATCCTGTGAGAGGTTTGTACCAAGCTCTAGCTATTTCTGCCATGTGTGTTCAAGAACAGCCTAATATGCGGCCTGTGATAACCGATGTGGTTACCGCATTAAACTACCTTGCCTCCCAGAGATATGATCCCCAAATTCATCATGTACAAAACTCCAAAAGAAGGGATGATGATCAAAGACATCTTGTTCGTGATGGTTCTTCCTCTGACAGATCTACAGACTAA 1356 0.444 MWKCDTRRQDGPYSRRHRVGPILDTRLLPCLHALVSVLGSVFLVYLRLRGIMGCFCFAKKSSGKSQANNYSQSAKPNNHTDTAKVDLNVNGKKEAHSKDNQLSLDAKRLNLTDNGDTSGSTAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDPNGLQGVREFVVEVLTLSLADHPNLVKLIGYCTDGDQRLLVYEYMPLGSLENHLHDLPRGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGHYPVRGLYQALAISAMCVQEQPNMRPVITDVVTALNYLASQRYDPQIHHVQNSKRRDDDQRHLVRDGSSSDRSTD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0143 451 PANTHER OS07G0668900 PROTEIN 66 423 - -
Alju02g0143 451 Pfam Protein tyrosine and serine/threonine kinase 142 348 IPR001245 GO:0004672|GO:0006468
Alju02g0143 451 MobiDBLite consensus disorder prediction 424 451 - -
Alju02g0143 451 SUPERFAMILY Protein kinase-like (PK-like) 121 414 IPR011009 -
Alju02g0143 451 FunFam Serine/threonine-protein kinase PBS1 214 429 - -
Alju02g0143 451 SMART serkin_6 137 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0143 451 FunFam probable serine/threonine-protein kinase RLCKVII 110 213 - -
Alju02g0143 451 Gene3D Transferase(Phosphotransferase) domain 1 214 439 - -
Alju02g0143 451 MobiDBLite consensus disorder prediction 422 451 - -
Alju02g0143 451 Gene3D Phosphorylase Kinase; domain 1 109 213 - -
Alju02g0143 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Alju02g0143 451 CDD STKc_IRAK 143 412 - -
Alju02g0143 451 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Alju02g0143 451 ProSiteProfiles Protein kinase domain profile. 137 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0143 Alju-ChrAlju02 1214121 1218113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0143 52 416 Glycoside Hydrolase AT3G07070 56.604 3.29e-147 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju02g0143 Pkinase 4.1e-43 CL0016