Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0139 ATGGAGCAGTCAGAAAAACCACCAAAGCAATCAGCAAAAAGGTCATCATTTCCGAGAGACCCACGTGGTTCGCTCGAAGTGTTCAACCCTTCCTCCTGCTCCACGGACAATCCATCAGACGCGCCGTTCCGATCTCAGCCAAAGTGGAAAACTTGGGTGGAGCCGCCAACTACCGCCACCAACCAGGATGAGATCACCAGCACATCATGGATGGCCCTCAAGGACTCCGATAGTCCACCGCCGCAGACTCTGTCCGCCATTCTCAACGAGCGACCTGAGCTGACCCCGAAATCTCCATCCGCCGTGAATTTTGCCGGAGACGTGGGCACGGCAGCGCAGAGAGCCGCTGAGTGGGGACTGGTGCTGAAGACTGACACGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGAAACTCGGGAGGAGAGGAACCAAATGCGAAGATCACGGGCACTTCGAGAAGGAACTCAAACAACTCGGTGAGAAGCTCCGGCGAATCGTCAGACGACGGAGGAAAAGAAACACGGGGAGTTCCGAGGATTTCAGAGGATTTGAAGGATGCTCTGTCAATGTTCCAACAGACTTTCGTGGTCTCGGATGCGACCAAACCCGATTATCCGATCATGTACGCCAGTGCCGGATTCTTTAGGATGACTGGTTATACTTCTAAAGAGGTCATTGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAGGACGTGGCAAAGATAAGGGAGGCGCTGCAAGCAGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAGGATGGCTCTCCTTTCTGGAACCTCCTCACTATTTCCCCCATCAAAGACGACGATGGCAATGTCATCAAATTTATTGGAATGCAAGTGGAAGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAAACGCTGCGTCCCAATGGATTGCCCGAATCTTTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCCTCCACCGTATCCGAGTTAGTGAAGGCAGTGAGGCGGCCCCGAGCACTCAGTGAATCAGGAAAGCGTCCATTGATCAGAAAATCTGGAGGTGATGAAGAACTCAGACTAGAAAGTTTGCCGAGAAGGAAATCGGAGAGCGTTGCTTCATTAAGGCCAAAATCACATGGGGGGCATCGAAATTCAATGCAACAAATCAATGAGCTGCCCGAAAAGAAACAGAAAAGTCGTCGTCGTTCTTTCATGGGGTTCATTAAGAAAAGTCAGCCCAATGATGAAAGCCTTGAGGAGAATGAAGTTGTGGAGGGCAGCTCAGAGAGTGAGGAAGAAGATGAGAGGCCTGATAGTATTGATGACAGCAAACTTGCGCAAAGAGAGAAGCGAAAGGGTCTTGATCTTGCAACAACACTTGAACGTATTGAGAAGAACTTCGTCATTACAGATCCAAGACTGCCTGATAATCCCATTATCTTCGCATCTGATAGTTTCCTAGAACTTACAGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAAAGAAAGAGAAGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTTCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAATATTTTATTGGTGTTCAACTTGATGGTAGCCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGGCCAAGGAGGGAGAACATTTGGTTAAAAAAACTGCGGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCGAATTTGAAACCAGAAGATTTATGGTTAAATCACTCAAAAGTGGTTCTTCCAAAACCTCATAGGAAGGATAACCCTGCTTGGAGAGCTATCCTGAAGATCCTAGAAAGTGGAGAACAGATGGGCTTGAAGCATTTTAGGCCAGTCAAACCTTTGGGATCTGGGGACACTGGCAGCGTGCATTTGGTGGAGCTTTGTGGAACTGGCCAATACTTTGCCATGAAGGCTATGGATAAGAGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATACTCGACATGTTGGACCATCCATTTCTTCCCGCATTATATGCTTCATTTCAGACCAAGACTCACATTTGTCTGATAACTGATTATTGTCGCGGTGGAGAACTGTTCCTGCTTCTAGACCGGCAGCCAACAAAAGTTATCAAAGAAGATGCAGCCAGGTTTTACGCTGCTGAGGTTGTGGTTGCGCTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTGCTCCAGGGCAATGGGCATGTGTCTCTTACAGATTTTGACTTGTCATGTTTGACATCCAGCAAACCACAGCTTTTAATTCCACCTTTAAATGAAAAGAAGAAACACAAAGCACAGCAGACTCCAATATTTGTGGCCGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACAGAGGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGCGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGATGTATGGATATACACCATTCAGGGGGAAGACAAGGCAAAAAACGTTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGATAAGTCTGCATGCAAAGCAGTTGATACACCGGTTGTTGCACAGAGATCCCAAGTACCGATTGGGCTCACTGGAAGGAGCAAACGAAATAAAGCGTCACCCATTCTTCAAAGGTGTCAGTTGGGCCCTCGTTCGTAGCATGTTCGACTTCAACCTCTGGTTTCGATCTTTCATTTTTGACGTAGTAACACTCTGTTTGATATGA 2928 0.4641 MEQSEKPPKQSAKRSSFPRDPRGSLEVFNPSSCSTDNPSDAPFRSQPKWKTWVEPPTTATNQDEITSTSWMALKDSDSPPPQTLSAILNERPELTPKSPSAVNFAGDVGTAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEEPNAKITGTSRRNSNNSVRSSGESSDDGGKETRGVPRISEDLKDALSMFQQTFVVSDATKPDYPIMYASAGFFRMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGSPFWNLLTISPIKDDDGNVIKFIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASSTVSELVKAVRRPRALSESGKRPLIRKSGGDEELRLESLPRRKSESVASLRPKSHGGHRNSMQQINELPEKKQKSRRRSFMGFIKKSQPNDESLEENEVVEGSSESEEEDERPDSIDDSKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDKEREVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGEHLVKKTAENVDEAVRELPDANLKPEDLWLNHSKVVLPKPHRKDNPAWRAILKILESGEQMGLKHFRPVKPLGSGDTGSVHLVELCGTGQYFAMKAMDKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCRGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSSKPQLLIPPLNEKKKHKAQQTPIFVAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMYGYTPFRGKTRQKTFANILHKDLKFPKSKPISLHAKQLIHRLLHRDPKYRLGSLEGANEIKRHPFFKGVSWALVRSMFDFNLWFRSFIFDVVTLCLI 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0139 975 MobiDBLite consensus disorder prediction 123 177 - -
Alju02g0139 975 FunFam Putative LOV domain-containing protein 194 350 - -
Alju02g0139 975 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g0139 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 201 293 IPR035965 -
Alju02g0139 975 SMART pas_2 182 251 IPR000014 -
Alju02g0139 975 SMART pas_2 459 528 IPR000014 -
Alju02g0139 975 FunFam LOV domain-containing protein 446 610 - -
Alju02g0139 975 Pfam Protein kinase domain 661 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0139 975 CDD PAS 472 572 IPR000014 -
Alju02g0139 975 CDD STKc_phototropin_like 656 955 - -
Alju02g0139 975 NCBIfam PAS domain S-box protein 482 572 IPR000014 -
Alju02g0139 975 NCBIfam PAS domain S-box protein 207 300 IPR000014 -
Alju02g0139 975 ProSiteProfiles PAC domain profile. 531 585 IPR000700 -
Alju02g0139 975 MobiDBLite consensus disorder prediction 51 89 - -
Alju02g0139 975 FunFam LOV domain-containing protein 657 741 - -
Alju02g0139 975 ProSiteProfiles PAC domain profile. 254 308 IPR000700 -
Alju02g0139 975 SMART serkin_6 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0139 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Alju02g0139 975 FunFam Putative LOV domain-containing protein 742 956 - -
Alju02g0139 975 Pfam PAS domain 480 572 IPR000014 -
Alju02g0139 975 Pfam PAS domain 201 297 IPR000014 -
Alju02g0139 975 MobiDBLite consensus disorder prediction 27 44 - -
Alju02g0139 975 ProSiteProfiles PAS repeat profile. 180 251 IPR000014 -
Alju02g0139 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 473 572 IPR035965 -
Alju02g0139 975 SMART pac_2 534 576 IPR001610 -
Alju02g0139 975 SMART pac_2 257 299 IPR001610 -
Alju02g0139 975 ProSiteProfiles Protein kinase domain profile. 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0139 975 MobiDBLite consensus disorder prediction 423 443 - -
Alju02g0139 975 Gene3D Transferase(Phosphotransferase) domain 1 742 953 - -
Alju02g0139 975 MobiDBLite consensus disorder prediction 144 165 - -
Alju02g0139 975 MobiDBLite consensus disorder prediction 340 378 - -
Alju02g0139 975 MobiDBLite consensus disorder prediction 1 102 - -
Alju02g0139 975 Gene3D PAS domain 446 610 - -
Alju02g0139 975 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
Alju02g0139 975 PANTHER FLIPPASE KINASE 1-RELATED 156 955 - -
Alju02g0139 975 SUPERFAMILY Protein kinase-like (PK-like) 642 958 IPR011009 -
Alju02g0139 975 CDD PAS 207 296 IPR000014 -
Alju02g0139 975 MobiDBLite consensus disorder prediction 329 452 - -
Alju02g0139 975 ProSiteProfiles PAS repeat profile. 457 530 IPR000014 -
Alju02g0139 975 ProSitePatterns Protein kinases ATP-binding region signature. 664 687 IPR017441 GO:0005524
Alju02g0139 975 Gene3D PAS domain 194 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0139 Alju-ChrAlju02 1194600 1203164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0139 1 953 AGC Kinase Gene Family AT3G45780 71.269 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju02g0139 Pkinase 1.9e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0139 02 1194600 1203164 Alju02g0139 02 1194600 1203164 ECH