Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0137 ATGAATCACATCGTCGCCAGATTCTCAGGCTCTGCCGAATTCCTCGGGAATATGCCGTCGCCGTACGCCATGTCAGCCCCGGCAAAGGGTTTTCAGTGCCAACCGGAGTCGGAGGTGAGCCACAGCAGTTGCAGCAGTGGGTGCAGCGGCCATGGATCGCCCACTTCTCTGACGAGTTACCAAGGCGTAATGTCTGAGAGAAGCATAAGTAGCCATTCTCTGCAGAAGTGCGGGGCCCACCACCCCGCTTCTGCTCCGTTCTTCTCCGACTTGCTGGAGGAGTCGCCGGTGAGAAAAGTTTGCAGTGCCGGTGATTTTCCGAGGATGAATGTGATGCAAAAGAATGGGCGGTCAGAAAGTGGAGTGTGGAGCGAAAGCAGTATGATCATCGAGGGAATAATGAGCAGAGCGCATCCTTATAGCCCGGAGGAGAAGAAAGTGAGAATTGAGAGATACAAAATCAAGAGACATAAGAGGAACTTCAACAAGACAATTAAGTATGTATGCAGGAAGACATTGGCGGACAGCAGGCCACGCATCAGAGGAAGATTTGCAAAGAGTGAAGAAAGTGATCAGAAGAAGAGTGATGATATGATTGAGGAAGAAGATTATGAGAATTGGGACAGTTTTTTTGAAACACTGGTGGTTGCAAATCTTGTTCACCAGCCATGA 672 0.497 MNHIVARFSGSAEFLGNMPSPYAMSAPAKGFQCQPESEVSHSSCSSGCSGHGSPTSLTSYQGVMSERSISSHSLQKCGAHHPASAPFFSDLLEESPVRKVCSAGDFPRMNVMQKNGRSESGVWSESSMIIEGIMSRAHPYSPEEKKVRIERYKIKRHKRNFNKTIKYVCRKTLADSRPRIRGRFAKSEESDQKKSDDMIEEEDYENWDSFFETLVVANLVHQP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0137 223 MobiDBLite consensus disorder prediction 180 200 - -
Alju02g0137 223 Pfam CCT motif 147 187 IPR010402 GO:0005515
Alju02g0137 223 ProSiteProfiles CCT domain profile. 145 187 IPR010402 GO:0005515
Alju02g0137 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 34 195 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0137 Alju-ChrAlju02 1189547 1190492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0137 136 199 C2C2-CO-like Transcription Factor Family AT5G24930 46.875 2.15e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g0137 CCT 4.6e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0137 02 1189547 1190492 Alju02g0137 02 1189547 1190492 ECH