Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0123 ATGGTTCAACAGGAATTCCGGAAAGGTCCATGGACAGAACAGGAGGACATCAAATTGGTCTCCTTTGTTGGCTTATTCGGAGACCGGAGATGGGATTTTATAGCCAAAGTTTCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTGCATCCTGGTCTCAAACGGGGCAAGATGACGCCCCAAGAAGAGCGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATTAAGAATTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAGACAAAGCGGGCGACCACTCCATCATCAACATCAAGTTGTCATTCTTCACTATCATCAAATAATCAAGCGGTGGGTTCACATCCTTCCAAGGAGAGTGGAGAAGAAAGCTTTTATGACACAGGAGGGCCTAATATGATTGACTCCACAGAAATCAAGATAGGGAAAGAACAAGGTGAACCGGGCTACTCCATGGATGACATATGGAAGGATATTGCTCTGTCAGAAGATAATGTTCAGAATCCAGTCCATGCGAGTGTTAGGCATATCGAAGAGGATTGCAGCTTCTTTTGTGCTCATCTGCCATCTCCTTCTTGGGAGTATTCTTCAGACTCGTTGTGGGTTATGGATGAAGAAGAGAGTAAGACGTTTCTCCCTTCCAGTGATAAATTATTTTCCAGTTTTGAACAAGGGGCAGCAACAGCATTTCTAACTGGCTAA 774 0.4535 MVQQEFRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRATTPSSTSSCHSSLSSNNQAVGSHPSKESGEESFYDTGGPNMIDSTEIKIGKEQGEPGYSMDDIWKDIALSEDNVQNPVHASVRHIEEDCSFFCAHLPSPSWEYSSDSLWVMDEEESKTFLPSSDKLFSSFEQGAATAFLTG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0123 257 MobiDBLite consensus disorder prediction 109 157 - -
Alju02g0123 257 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Alju02g0123 257 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 131 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju02g0123 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Alju02g0123 257 FunFam Myb transcription factor 8 60 - -
Alju02g0123 257 SMART sant 7 57 IPR001005 -
Alju02g0123 257 SMART sant 60 108 IPR001005 -
Alju02g0123 257 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Alju02g0123 257 CDD SANT 63 106 IPR001005 -
Alju02g0123 257 Gene3D - 63 134 - -
Alju02g0123 257 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Alju02g0123 257 FunFam MYB transcription factor 63 129 - -
Alju02g0123 257 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Alju02g0123 257 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Alju02g0123 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Alju02g0123 257 CDD SANT 10 55 IPR001005 -
Alju02g0123 257 MobiDBLite consensus disorder prediction 115 141 - -
Alju02g0123 257 Gene3D - 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0123 Alju-ChrAlju02 1038757 1039762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0123 1 251 MYB Transcription Factor Family AT5G59780 60.159 1.44e-94 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g0123 Myb_DNA-binding 6.9e-15 CL0123