Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0121 ATGCAACGCTCCTGTCTGCGCCTGGCTAAGTCAGGTCTGGGCTTAGACAAAAAGGCTCCACGCTGGCCATTGAAACGCGGTCACGCTAGCACTGGGAAACTGCATTTCATGCAGCAAGTTTCACTTAATCCTCCCACCTCCAAACCTGCCATGAAGAGAGCAAGAGATGAAGGTGAGTCAGAGGGCTTAAACATGGTTAAGTGTTTGATGTTACTGTCCAGAGTTGGGGTGACCAACCCTTCCTCACAGTGTAGTGATGGAGGTTTTAAGTGCAAGACTTGTAACAGAGTGTTCCCTTCTTTTCAAGCTCTAGGAGGGCACCGAGCCAGCCACAAGAGGCCCAAGCTCATGCTTTCTTCCTCACATGATCTACCTGTGAAGCTCAACAAGACTCATCTCTGCCCCATTTGCGGACTCGAGTTTGGAATCGGACAAGCCCTCGGAGGTCACATGAGAAAGCATAGAACTACTCCTGTTAATAAGCATAACAAGTTTGATTCATGCCTGGACTTGAACTTGACGCCGTTAGAAAATGATGATCTCAACCTCCACTTGAGGACGCCCCTAGCTAGTTAA 576 0.4878 MQRSCLRLAKSGLGLDKKAPRWPLKRGHASTGKLHFMQQVSLNPPTSKPAMKRARDEGESEGLNMVKCLMLLSRVGVTNPSSQCSDGGFKCKTCNRVFPSFQALGGHRASHKRPKLMLSSSHDLPVKLNKTHLCPICGLEFGIGQALGGHMRKHRTTPVNKHNKFDSCLDLNLTPLENDDLNLHLRTPLAS 191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0121 191 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Alju02g0121 191 Gene3D Classic Zinc Finger 87 155 - -
Alju02g0121 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Alju02g0121 191 ProSitePatterns Zinc finger C2H2 type domain signature. 134 154 IPR013087 -
Alju02g0121 191 Pfam C2H2-type zinc finger 89 114 - -
Alju02g0121 191 Pfam C2H2-type zinc finger 132 156 - -
Alju02g0121 191 PANTHER ZINC FINGER PROTEIN ZAT5 54 178 - -
Alju02g0121 191 SMART c2h2final6 132 154 IPR013087 -
Alju02g0121 191 SMART c2h2final6 89 111 IPR013087 -
Alju02g0121 191 SUPERFAMILY beta-beta-alpha zinc fingers 89 154 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju02g0121 Alju-ChrAlju02 1017125 1017874 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0121 51 185 C2H2 Transcription Factor Family AT2G28710 46.795 5.58e-34 116
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju02g0121 zf-C2H2_6 3.2e-08 CL0361