LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0104	ATGCCTTCAAATACGCTATTCTATAGTCATTTCTTAGACATTATGGTTGAAAATGATAAATCAACTTGCCTTCTCTTTCAATCACTACATCTTTCTTTCTTCTTTGGCTTCTTCTTCCTTGCCAAGGGCAAGTGCAAGGCGAAGGGATTAAGTCTCGTTTCTGTCATGGGTATTTGCTTGAGCGCTCAAATTAAAGCAGAGAGCCCATGCAACACAGGGTTGAATTCAAAATATGTGAGCAGTGACGGAAAGGATGCAAGCAGCACAGGAAGCAAGGCGTCGGCGTTGTCAGTTCCTCAGACTCCAAGGAGTGAGGGAGAGATCTTGCAGTCATCCAATTTGAAAAGTTTCACTTTAGCAGAATTGAAGGCTGCCACCAGGAATTTCCGTCCAGATAGTGTGTTGGGAGAAGGTGGCTTCGGATCAGTGTATAAAGGGTGGATCGATGAGCACTCTCTGATTGCTGCCAAACCAGGGACTGGCATGGTTATAGCTGTCAAAAGACTTAATCAAGATGGTTTGCAAGGTCACAAGGAGTGGTTGGCCGAAGTGAACTACCTGGGACAGCTTTCTCATCCACATCTCGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTGTACGAATTCATGCCTCGAGGAAGCTTGGAGAACCATCTGTTCAGAAGAGGTTCATATTTTCAACCTATCTCCTGGAGCCTCCGGATGAAGGTTGCTCTTGGCGCCGCCAAAGGTCTTGCGTTTCTTCACAGCGGCAACATCAAAGTCATATACCGTGATTTCAAAACTTCAAATGTCTTGCTAGATTCTAAATATAATGCAAAACTTACTGATTTCGGGCTGGCAAAAGACGGACCAACGGGCGACAAGAGTCACGTCTCCACCAGAGTCATGGGAACCTATGGATATGCGGCTCCTGAATATCTAGCCACAGGTCACCTGACGGCCAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTACTGGAAATGTTATCGGGGCGACGAGCTGTTGATAAGAATAGGCCGTGTGGACAGCACAATTTGGTGGAATGGGCAAAGCCCTGTTTGGCTAACAAGCGAAAGATCTTTCGCATTATGGACAGTCGTCTGGAAGGTCAGTATTCGATCGACGGGGCGCATAAGACGGCGATGCTGGCTCTGCGATGCCTCTCTGTCGAGCCCAAAATAAGGCCCAACATGGATGAGGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCGGTTGATGAAAATGGTGGAAGCCGTCACAACTCTCGGCCTCGTTCTCGGAGAAGAAGCGCCGATGACTTTACCAGCCGGAGGGCTTATCCCAAGCCCTCTGATTCTCCTCTCTATGCTTGA	1371	0.4741	MPSNTLFYSHFLDIMVENDKSTCLLFQSLHLSFFFGFFFLAKGKCKAKGLSLVSVMGICLSAQIKAESPCNTGLNSKYVSSDGKDASSTGSKASALSVPQTPRSEGEILQSSNLKSFTLAELKAATRNFRPDSVLGEGGFGSVYKGWIDEHSLIAAKPGTGMVIAVKRLNQDGLQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPISWSLRMKVALGAAKGLAFLHSGNIKVIYRDFKTSNVLLDSKYNAKLTDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLANKRKIFRIMDSRLEGQYSIDGAHKTAMLALRCLSVEPKIRPNMDEVVKALEQLQVSVDENGGSRHNSRPRSRRRSADDFTSRRAYPKPSDSPLYA	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0104	456	ProSiteProfiles	Protein kinase domain profile.	129	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0104	456	Pfam	Protein kinase domain	132	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0104	456	CDD	STKc_IRAK	135	414	-	-
	Alju02g0104	456	MobiDBLite	consensus disorder prediction	84	104	-	-
	Alju02g0104	456	Gene3D	Transferase(Phosphotransferase) domain 1	215	434	-	-
	Alju02g0104	456	ProSitePatterns	Protein kinases ATP-binding region signature.	135	167	IPR017441	GO:0005524
	Alju02g0104	456	Gene3D	Phosphorylase Kinase; domain 1	104	214	-	-
	Alju02g0104	456	SUPERFAMILY	Protein kinase-like (PK-like)	102	411	IPR011009	-
	Alju02g0104	456	FunFam	Serine/threonine-protein kinase BIK1	96	214	-	-
	Alju02g0104	456	MobiDBLite	consensus disorder prediction	418	456	-	-
	Alju02g0104	456	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	260	272	IPR008271	GO:0004672\|GO:0006468
	Alju02g0104	456	MobiDBLite	consensus disorder prediction	424	445	-	-
	Alju02g0104	456	FunFam	Probable serine/threonine-protein kinase PBL8	215	430	-	-
	Alju02g0104	456	PANTHER	OS01G0588500 PROTEIN-RELATED	93	415	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0104	Alju-ChrAlju02	913421	917248	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0104	107	430	Glycoside Hydrolase	AT3G07070	49.231	1.43e-106	320

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Alju02g0104		Pkinase	4.2e-45	CL0016