Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0095 ATGGATTCCAATTGCATCTCCAGTTTCATCCACGGATATCAATCCAACCAAATGCCTTGTCCGCTCAATTACGATCCGTATACTGATCCCTTAAATGGGATTCAGATACGTGACCCGTTCATGAACTTTGGATCTGTGGATACGAACTTTGCCGGAAATACTGCTTCTTTGTCTTCCGTTAGTGCGAATTTAGACTCTCCCTTAGACGAGACAGACTTCTCTGGCACTATGCTTGGGTACATAAACCAAGTGCTGATGGAAGAGGACATGGGAGAACAGCCCAGCATGTTTCATGATTCCTTGGCTCTTCAGGCGGCCGAGGAATCGTTATACGAGGTTATTGGTGGAAAATACCCTTCAGATTCCTCCATTCAACCCCGTTTTCCCGACTATCACCGTGTGGAGACCACCGAGGAAAGTATCTCCGGCAACATCAGTGATCATAGTAGCAGTGGCAGTTATGCAGCTAACGGTACCAACTCTGTTGAGTCCCAGTGGAGTAACTTGGACTTTACAGAGTACAAACCTTCTCTACTGCAAGCCACGTTTCCTGTAGATTTCGTTTTCCAGTCTCCTTCAACATCCATAGCACAACTTTGCACCAACCATATAAGCAAATCCAGGAATACCCGCCATAATTATAATGGGTTCGTGGGGAATTACAATACAGGGACTGGCTTCTCAGATTCTACATTGCTTAGCATGAATGAGTCTCTGTTTCAATTTAAGAGAGGTGTGGAGGAAGCCAGTAAGTTTCTGCCCAAGGACAATCATTTGATTGTTGACATGGGGGCCAACATCATTTCTCCTCCATTCGGAAATACTCTAGAGGCTGTGGTCAAGACAGAGAGATATGAAATGGAGCACGTACCTGCCAAGTCAAGAGGAAGGAAGAATCATGAACGGGAAGATGAGATAGATTTAGAGGATATGCGAAGCAGGAAGCAACCAGCAGTTTACATAGATGAGAGTGAGCTATCAGAATTATTTGATAAGGTGCTTATTGGCACAGGCTGGGGAAAAGACCCACCTCCCATGTGTATTTTCCATGAAAATTGCAATCATGGAGCACATGGGAGTGAGCAGAAAAAGGAAGAGTCGAACAAATCCAGCGATGGAAAGAACCGTGTTAGAAGACAGAGTTATAATAACCACAATGAAGTGGTGGATCTAAGGGCATTGCTTATTCAATGTGCACAAGCTGTATCATCTGATGATCGTGGGACTGCTAATAAGTTATTAAAGCAGATTAGGCAGCATTCTTCCTCAACAGGCAGCGGATCTCAGAGGCTGGCCCACTGCTTTTCAAATGCCCTTGAAGCACGCTTGGCCGGCACTGGCTCTCAGATCTACACCGCTTTATCCTCCAAAAGAACTTCTGCTGCTGACATGATAAAGGCACACCAAATGTATATTACAGCTTGTCCATTCCAGAAGGTTGCCGTGATTTTTGCAAACCATACAATTTTGCATCTTGCCAGTGAGGCAGAAACACTCCACATTGTACATTTTGGCATTCGTTATGGCTTCCAATGGCCTTCCTTTATCCTTCGTCTCTCCAAACGAGCCGGTGGACCCCCCAAGCTGCGCATTACAGGGATTGATCTCCCACAACCTGGTTTGAGGCCAGCAGAGAGAGTCCAAGAGACGGGGAGGCGCCTCACCAGGTATTGTGAGCGATACAACGTTCCATTTGAGTATAATGCCATCGCACAAAAATGGGAGACCATCAAGCTTGAGCACCTGAAGATAAAGAAAGGTGAACTCGTGGTTGTGAATTGTGAGAAGCGATTTAAGAATCTTCTTGACGAGACAGTTGTGGTGAATAGCCCGAGAGACAGTGTTTTAAAGTTAATCAGGGAGGCAAACCCCAGTATGTTTTTGCAGACTATAGTGAACGGGTGCTATAATGCACCATTCTTTGTGACACGTTTCCGGGAGGCTCTTTTCCATTACTCTTCCATGTTCGACATGCTTGATACCAATACTGGTCGTGAAGATCCAATGAGGTTGATGTTTGAAAAGGAGTTCCTTGGACAGGAGGTGACAAATATTATAGCTTGTGAGGGGTCAGAGAGGACAGAGAGGCCTGAGACGTACAAGCAATGGCAGGTGCGGAACATGAGGGCAGGGTTGAGGCAGGTGCCCTTGGATGGGCATCTGGTGAGTAAATTAAGAGGCAAGGTGAGAGAAGCGTTCCACAGTGACTTCATGCTTGATGAAGACGCTAATTGGATGCTGCAAGGTTGGAAGGGCCGAATTATGTATGCTTCCTCCTGTTGGGTGCCTTCGTAG 2295 0.4606 MDSNCISSFIHGYQSNQMPCPLNYDPYTDPLNGIQIRDPFMNFGSVDTNFAGNTASLSSVSANLDSPLDETDFSGTMLGYINQVLMEEDMGEQPSMFHDSLALQAAEESLYEVIGGKYPSDSSIQPRFPDYHRVETTEESISGNISDHSSSGSYAANGTNSVESQWSNLDFTEYKPSLLQATFPVDFVFQSPSTSIAQLCTNHISKSRNTRHNYNGFVGNYNTGTGFSDSTLLSMNESLFQFKRGVEEASKFLPKDNHLIVDMGANIISPPFGNTLEAVVKTERYEMEHVPAKSRGRKNHEREDEIDLEDMRSRKQPAVYIDESELSELFDKVLIGTGWGKDPPPMCIFHENCNHGAHGSEQKKEESNKSSDGKNRVRRQSYNNHNEVVDLRALLIQCAQAVSSDDRGTANKLLKQIRQHSSSTGSGSQRLAHCFSNALEARLAGTGSQIYTALSSKRTSAADMIKAHQMYITACPFQKVAVIFANHTILHLASEAETLHIVHFGIRYGFQWPSFILRLSKRAGGPPKLRITGIDLPQPGLRPAERVQETGRRLTRYCERYNVPFEYNAIAQKWETIKLEHLKIKKGELVVVNCEKRFKNLLDETVVVNSPRDSVLKLIREANPSMFLQTIVNGCYNAPFFVTRFREALFHYSSMFDMLDTNTGREDPMRLMFEKEFLGQEVTNIIACEGSERTERPETYKQWQVRNMRAGLRQVPLDGHLVSKLRGKVREAFHSDFMLDEDANWMLQGWKGRIMYASSCWVPS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0095 764 ProSiteProfiles GRAS family profile. 382 762 IPR005202 -
Alju02g0095 764 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 341 756 IPR005202 -
Alju02g0095 764 MobiDBLite consensus disorder prediction 356 383 - -
Alju02g0095 764 MobiDBLite consensus disorder prediction 288 308 - -
Alju02g0095 764 MobiDBLite consensus disorder prediction 351 383 - -
Alju02g0095 764 Pfam GRAS domain family 391 761 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0095 Alju-ChrAlju02 860919 863213 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0095 77 764 GRAS Transcription Factor Family AT1G07530 53.371 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g0095 GRAS 3.3e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0095 02 860919 863213 Alju10g0158 10 1172895 1175219 CCT
Alju10g0155 10 1156562 1158900 Alju02g0095 02 860919 863213 CCT
Alju02g0095 02 860919 863213 Alju02g0095 02 860919 863213 ECH