Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0093 ATGGATCCAAATTTGTCTGCAGCTCGTGATTTCAGGAATGGATACCAAATAGCTGATGGCGCCGTCTTCTCTGGTACTAATCAATACCTAAATCTAGGAGATGAATGGAATCCTGACGAAGACCATCAGACCGATCTTAATTACTACCGTGACATTTTTCATCAACCTGATGTGGACCCACTTAGTTGTGCTCCGCACACAAGCTTGATTTCTGAAGGAGCACCGCCGAATCCATCCTGGAGTGCGAGTTCTGTGGAAGGTGTGCCAGATGTCCCGTATTCAGCCGCGACTTCGGCTCCGGATCCTTCTCTGGAAGAAGAGTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCATCCATGTTTTATGATCCGCTCAGTCTAAAACTTACTGAGAAATCATTCTATGATGCTCTTCGATACAACGACTCTCTCTCCCCCAATGAGCACCCTCTCATTGACACTGATGACAGCCCAGACGGTCATTCCTCTGGAACTGCTACTGATTCTAGTACCGGCGGCAGCGGCAGCGGCAGCACCAGCACAAGCACTAACACTAACACTAACACTAACCCCAACGACTTAGAATTAAGGACCTCTTCGCCAGAGACCCCTGTTTTGGGCGATTATTCTTTCCAGTTCAAATCTCCATCCGTATCTCAGCAGCCCTCACAACCTCCAAATACTTCAACTAATATCAGTGACGGACTGCTGAATTTGGATTCTTCTATTACTCAGCTTTTGTCTCGAAATATCTTTAGTGACGCAGAATCTGTCTCGCAATTCAATAAAGGTTTAGAGGAAGCAAGCAAATTTCTTCCTAGAAGAGTTCAACTCGTCACTGGTATGGAGAGCACCACAGTGTCCGTACAGCCAAAGGTGGTGGGAGGAAAGGCGCCGCTGAATACGGAGAAAGGGGCTAGGGAAAATTTTCATGGGTTGAAGGGTAGAAAGAATCACGACCGCGATGGTAGTGTTGATGAAGAAGAAGGGAGAAGCAAGAAGCAGTCAGCAGTATATGTTGATGAGAGTGAATTATCGGAGATGTTTGACAAAGTGTTGCTTAGTGTTGAGAATGTTCCACTGTGTTCTGAGCACGAAAGCGTGCACTGTGGATCAGCGAAAGACATGCAGACAAGCGAGCAGGCTGTGGAATCATCTGATGGAGAGAAGACACACTCTAAGAAACAAGGCAGGAAGAAGGAAACGGTGGATTTGAACACACTTTTGGTTTTATGTGCACAAGCCGTGTCTGCCAGCGATAGAAGGACTGCTCATGAATTACTAAAACAGATCAGGCAACATTCTTCACCCTTGGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCCAACGGCCTTGAGGCACGTTTGGTTGGTGGTGGTGCGGGAACCCAGCTATTTTATACTTCCCTGAGCTCCAAGAGGATCTCTGCTGCTGAAATTTTGAAAGGTTACCAAGTTTCAATGTCGGCCTCACCTTTTAAGAAGTTTGCACATTTCTTTGCAATAAAAATGATTTTAAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTATTGATTTTGGTATCCTGTACGGTTTCCAGTGGCCAATACTCATCAAATTTCTCTCAAATAGAGCTGGTGGACCTCCCAAGCTACGCATCACTGGAATAGAATTTCCCCAACCTGGCTTTCGTCCAGCAGAAAGAATTGAGGAAACTGGTCGTCGTCTTGCTAACTATTGCAGACGATTTAATGTTCCCTTCGAGTACAAAGCTATAGCATCACAAAAATGGGAAACCATCCAAATTGAGGACCTTAAGATTGAGAGGAATGAGGTACTTGCTGTGAACTGTTTGATGAGGTTAAAGAATTTACTGGATGAGACAATTGAAGTGAATAGTCCTAGGAATGCAATTCTAAATCTAATAAGGAAGATGAAACCGGACCTCTTTGTTCAATGCATTGTTAATGGGTCCTACAATGCCCCTTTCTTTGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCGGCATTGTATGATATGTTTGACACTTTGGTACCCCGTGAAAACCAATGGAGGTTGATGCTTGAGAAAGAAATTTATGGTCGGGAGGCTATGAACGTTGTGGCATGTGAAGGATTAGAAAGGGGACAAGATGGAGGCGGGGTACCATAA 2196 0.4495 MDPNLSAARDFRNGYQIADGAVFSGTNQYLNLGDEWNPDEDHQTDLNYYRDIFHQPDVDPLSCAPHTSLISEGAPPNPSWSASSVEGVPDVPYSAATSAPDPSLEEEYDFSETIKYMSQVLMEENLEQKPSMFYDPLSLKLTEKSFYDALRYNDSLSPNEHPLIDTDDSPDGHSSGTATDSSTGGSGSGSTSTSTNTNTNTNPNDLELRTSSPETPVLGDYSFQFKSPSVSQQPSQPPNTSTNISDGLLNLDSSITQLLSRNIFSDAESVSQFNKGLEEASKFLPRRVQLVTGMESTTVSVQPKVVGGKAPLNTEKGARENFHGLKGRKNHDRDGSVDEEEGRSKKQSAVYVDESELSEMFDKVLLSVENVPLCSEHESVHCGSAKDMQTSEQAVESSDGEKTHSKKQGRKKETVDLNTLLVLCAQAVSASDRRTAHELLKQIRQHSSPLGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRISAAEILKGYQVSMSASPFKKFAHFFAIKMILKAAEKAETLHIIDFGILYGFQWPILIKFLSNRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCRRFNVPFEYKAIASQKWETIQIEDLKIERNEVLAVNCLMRLKNLLDETIEVNSPRNAILNLIRKMKPDLFVQCIVNGSYNAPFFVTRFREALFHFSALYDMFDTLVPRENQWRLMLEKEIYGREAMNVVACEGLERGQDGGGVP 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0093 731 MobiDBLite consensus disorder prediction 153 244 - -
Alju02g0093 731 Pfam GRAS domain family 418 724 IPR005202 -
Alju02g0093 731 ProSiteProfiles GRAS family profile. 408 731 IPR005202 -
Alju02g0093 731 MobiDBLite consensus disorder prediction 397 411 - -
Alju02g0093 731 MobiDBLite consensus disorder prediction 319 351 - -
Alju02g0093 731 MobiDBLite consensus disorder prediction 170 244 - -
Alju02g0093 731 MobiDBLite consensus disorder prediction 65 106 - -
Alju02g0093 731 MobiDBLite consensus disorder prediction 307 351 - -
Alju02g0093 731 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 370 723 IPR005202 -
Alju02g0093 731 MobiDBLite consensus disorder prediction 380 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0093 Alju-ChrAlju02 852474 854767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0093 113 723 GRAS Transcription Factor Family AT1G07530 51.669 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g0093 GRAS 3.3e-90 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0093 02 852474 854767 Alju10g0155 10 1156562 1158900 CCT