Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0081 ATGCCGACGATTGAGATAGGGGAGGATCATGTGGGTACGGATGCACACTGTGCCATTTGTAAAGAAGCGTTTGAGGGAGGTTCAGAGGCACGCGAGATGCCCTGCAAGCACATTTACCACTCGGATTGCATTGTTCCGTGGCTTTCAAGGTGCAATTCATGTCCTGTGTGTCGCAACGAGTTGCCTTCCGACGGAAACCATGAGGAAAGTATAGTGTCGGGGCAGATCGACGAAGAAACGATAGGATTAACAATATGGAGGCTGCCAGGCGGAGACTTGGCCGTAGGAAGGTTTCCCAACGATCAGGGTGATGGGCAGAATCATTTGCCAGTTGTATACACAGAAATGGATGCTGTTAATGGCGTTCCTAGAAGAGTTTCCCGAGCGATGAGAAGTGTTAGACTTGGCCAAAATCGTGGACTGAGCAGGATGTTTCGCAATTTCTTGGCATTCTTCTGTAGGCTTGGGTGTAGGTCAACTTCATCCTCTGAATGGGCCCATTAG 504 0.496 MPTIEIGEDHVGTDAHCAICKEAFEGGSEAREMPCKHIYHSDCIVPWLSRCNSCPVCRNELPSDGNHEESIVSGQIDEETIGLTIWRLPGGDLAVGRFPNDQGDGQNHLPVVYTEMDAVNGVPRRVSRAMRSVRLGQNRGLSRMFRNFLAFFCRLGCRSTSSSEWAH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0081 167 ProSiteProfiles Zinc finger RING-type profile. 17 58 IPR001841 -
Alju02g0081 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 62 - -
Alju02g0081 167 Pfam Ring finger domain 16 58 IPR001841 -
Alju02g0081 167 SUPERFAMILY RING/U-box 6 64 - -
Alju02g0081 167 SMART ring_2 17 57 IPR001841 -
Alju02g0081 167 Pfam Protein of unknown function (DUF1117) 81 164 IPR010543 -
Alju02g0081 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 75 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0081 Alju-ChrAlju02 769101 769604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0081 1 69 C3H Transcription Factor Family AT5G01980 52.174 1.48e-19 82.8