Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0069 ATGTTTCTTGAATTGTTACGGCACCTTCTACCCCCACATCCTCTAGGCATTTCTGATCGTGGGGGAAGTTACTCGCTCTCATGCGGGAAGTTATTGACTCACACGGTGTTACATCTCTGTCTTGGCGTCTCCTTTAAAACCCGCATAAAGCCCTTCCAACAGGGTGATCGTGTCCATGCATATGTGCGAAGTGGATTTGTTCATCACCATAAGAAACATCTGGAAGAGGGCGCAGTTGTGGAGCTCTCCAATTTCGTCATGGTTCCTGCCACTGGGTCGTACCAGCCAACTGAACACCAGTATCGTGTTAACTTCCAGTTTTCTACTGTTGTCCAACCTTACAAGGATGATCATAGCATCTCACGCTATGGTTTTGCTTTCAAGAATTTCTCTGACATACTCTCTTCAGACTTGGATGATCGTTTTCTGTTTGACATTGTTGGGAGGGTGTCTGCTATGGGCCAACTAGAAGAGTGCACAGTGCAAGGACGACGTCAGCATCGAGTCGACATAGAATTAGCGAATGAAGACCTAGAACGTCTCCAATGTACCCTTTGGGGGGAATTTGCAGATGACCTGCTATCATATATGGCCTCTCACAAGTCTGGCCCCGTCGTGATCATACTCCAGTGGTGCAAGGCGCGAGAATTTAACCGAGTTGATGTCTCACAGCCACCAGACCGTATTACACCTCAGGGTACTTTAACTCTCGCAGAAGAGTTGCTGGGAAACCCAGACAGACGACAGATCCAAGGAATACGTAAAGGGCCAGCGAATAAGATGCCTGTGGTGTTAGCTGAAATTGTTGACGTCCGTTATGAGAATGACTGGTTTTACAACTCATGTAAGGTGGATGGAAAGAAAGTTATTCCAGACGGGGACAGTTTTTTTTGCGAAAAGTGTAGCGGGATAGTAAAGAATGTGATTCCCAGGTTCATGGTGAAGTTTGAAGCTATGAACGAGACTGGGACTTGCATCTTTGTGTTATTTGATAGGGAGTTCTCTAAGTTGGCCGGCTGTTCTGCAGTGGAGATGATAGATCGAGTAATTCATCAGCCTATTCACCATGATGATGATGTTGAAAATGACAATGTTCTCCCTACGGATGTTGTGGACAAGATTGTAGGCAAAAATTTTTTGTACATGTTAAGAATTTCTAAGGAATATGTGGATGGTTCTTCCAGTTCATGCATTGTGACGCGTTTGACTTCAGATTCTGATATTATTGAAGCGTTTGAGGCTGAACAAGATGCTCCAACTGGCTCCCCTACAATGGTGTCTTCCAGCCATGAAGATGACCCTGATGTCAACATGTCCCTTCTTGACTCTGACAGTGCAAGCTCATCGGTGATTGCGGGTGAAAAAGTAGGTGTCAAAGTAAAAATTGAAAAGCCTGATTCTGCTCATGATGATGATGAATGCTTAGCTAATTATTTGGTTAGCACTTCAGACAAGCCAAAACGTGAAGATAAAGTTGTTAAAGTGTCGACAAAGAAGCATAAGTTTGTCATTGATGATTATGGTAGTTTGTTGTTTCTGTATGTTTTAGGCTTTTCTCAATTGTTATGA 1569 0.4385 MFLELLRHLLPPHPLGISDRGGSYSLSCGKLLTHTVLHLCLGVSFKTRIKPFQQGDRVHAYVRSGFVHHHKKHLEEGAVVELSNFVMVPATGSYQPTEHQYRVNFQFSTVVQPYKDDHSISRYGFAFKNFSDILSSDLDDRFLFDIVGRVSAMGQLEECTVQGRRQHRVDIELANEDLERLQCTLWGEFADDLLSYMASHKSGPVVIILQWCKAREFNRVDVSQPPDRITPQGTLTLAEELLGNPDRRQIQGIRKGPANKMPVVLAEIVDVRYENDWFYNSCKVDGKKVIPDGDSFFCEKCSGIVKNVIPRFMVKFEAMNETGTCIFVLFDREFSKLAGCSAVEMIDRVIHQPIHHDDDVENDNVLPTDVVDKIVGKNFLYMLRISKEYVDGSSSSCIVTRLTSDSDIIEAFEAEQDAPTGSPTMVSSSHEDDPDVNMSLLDSDSASSSVIAGEKVGVKVKIEKPDSAHDDDECLANYLVSTSDKPKREDKVVKVSTKKHKFVIDDYGSLLFLYVLGFSQLL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0069 522 SUPERFAMILY Nucleic acid-binding proteins 261 394 IPR012340 -
Alju02g0069 522 Coils Coil 164 184 - -
Alju02g0069 522 Pfam Replication factor-A C terminal domain 268 385 IPR013955 -
Alju02g0069 522 Pfam Domain of unknown function DUF223 53 138 IPR003871 -
Alju02g0069 522 Gene3D - 243 411 IPR012340 -
Alju02g0069 522 CDD RPA1_DBD_C 264 388 IPR047192 -
Alju02g0069 522 Gene3D - 53 117 IPR012340 -
Alju02g0069 522 MobiDBLite consensus disorder prediction 414 433 - -
Alju02g0069 522 SUPERFAMILY Nucleic acid-binding proteins 54 118 IPR012340 -
Alju02g0069 522 CDD RPA1_DBD_B_like 145 222 - -
Alju02g0069 522 CDD RPA1_DBD_A_like 53 111 - -
Alju02g0069 522 SUPERFAMILY Nucleic acid-binding proteins 125 224 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0069 Alju-ChrAlju02 677202 680166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0069 77 388 Core DNA Replication Machinery Family AT5G45400 21.229 3.24e-08 54.7