Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0065 ATGAGAGAAGACACCGACTCAGATAACGAATATCCAGAAGTGGAGGAATGTAGGTTGTGTTTTAGTTTGGGGGAAGATGTTATGATTGAGTGTGATGATTGTTTAGGTGGCTTTCATTTGAAATGTTTGACTCCACCATTGAAGGAGGTTGCGGAAGGAGATTGGATTTATGGGTTTTGTGAGGCTCGTAAGATAGGCAGAGACGTTAGTTTTCCCATGCCTCCGGTGGGCAAGAAGCTAGTTAGGACATTAAGGGAGAAGCTTCTTTCCAGCGATTTGTGGGCTGCTCACATTGAAAGTATATGGAAAGAAGGGTATGGTACCTATTATTGTCGTGTCAGGTGGTATGTGATCCCAGAAGAGACAGCTATTGGAGACAACCACATAATCTGA 393 0.4351 MREDTDSDNEYPEVEECRLCFSLGEDVMIECDDCLGGFHLKCLTPPLKEVAEGDWIYGFCEARKIGRDVSFPMPPVGKKLVRTLREKLLSSDLWAAHIESIWKEGYGTYYCRVRWYVIPEETAIGDNHII 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0065 130 SMART PHD_3 16 61 IPR001965 -
Alju02g0065 130 Pfam PHD-finger 17 61 IPR019787 -
Alju02g0065 130 PANTHER PHD FINGER PROTEIN 2 63 - -
Alju02g0065 130 FunFam Origin recognition complex subunit 1 12 79 - -
Alju02g0065 130 Gene3D - 81 130 IPR043151 -
Alju02g0065 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 65 IPR013083 -
Alju02g0065 130 SUPERFAMILY FYVE/PHD zinc finger 3 61 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0065 Alju-ChrAlju02 655982 656499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0065 2 125 Core DNA Replication Machinery Family AT4G12620 60.938 2.40e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Alju02g0065 PHD 2.6e-07 CL0390