Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3787 ATGGCGAGGAAATGCTCGCATTGTGGCAACATAGGCCACAATTCAAGGACTTGCACTTCTTCCATGAGAGGTGCTTTTGTACGCCTTCGACTCTTTGGTGTTCAACTCGACATCTCCTCTTCCTCTTCTTCTTCTGCCATTAAGAAAAGCTTCAGCATGGACTCTTTGTCCTCTTCTTCATCTCCTTCTTCTTCCTCCAGATTGACCATCGACGACAGAACCTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGCCGAGTTCAAGACAAGAGAAAAGGAGTTGCATGGACAGAAGAGGAGCACCGAGCATTCCTGGTAGGGCTGGAGAAGCTGGGGAAGGGAGACTGGAGGGGAATCTCCAGGACCTATGTCACCACCAGAACCCCTACTCAGGTGGCTAGCCATGCTCAGAAATACTTCCTCCGTCTTGCCTCCCTTCACAAGAAGAAGCGACGCTCTAGTCTTTTCGATATGGTTGGAAGCAGCAGTGAAGGGCATCATAGTCATCCTAACAAGGCAGGCGATTCATCAGTGGAGACTGATTTGCGGCTGCTTGTCCCTGATAATATGGAAGCCGCCAACAAATCATCAGATGATAAGCAAATTATACAAGATCTTACGGATGATGACAATTCTCAAAAATCTTCCAATGCGTCAGCACTTGATCTGGAGCTCACTCTTGCAGCCCCCAATAATAATAACACTCTCCATCAGCACCAAAATACCCTTCTTGGTCCAATCATCACCGTCACTTAG 756 0.4868 MARKCSHCGNIGHNSRTCTSSMRGAFVRLRLFGVQLDISSSSSSSAIKKSFSMDSLSSSSSPSSSSRLTIDDRTSLGYLSDGLLGRVQDKRKGVAWTEEEHRAFLVGLEKLGKGDWRGISRTYVTTRTPTQVASHAQKYFLRLASLHKKKRRSSLFDMVGSSSEGHHSHPNKAGDSSVETDLRLLVPDNMEAANKSSDDKQIIQDLTDDDNSQKSSNASALDLELTLAAPNNNNTLHQHQNTLLGPIITVT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3787 251 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 142 IPR006447 GO:0003677
Alju01g3787 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 144 IPR017930 -
Alju01g3787 251 ProSiteProfiles Myb-like domain profile. 88 140 IPR001005 -
Alju01g3787 251 CDD SANT 95 140 IPR001005 -
Alju01g3787 251 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Alju01g3787 251 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Alju01g3787 251 MobiDBLite consensus disorder prediction 155 178 - -
Alju01g3787 251 Gene3D - 94 146 - -
Alju01g3787 251 PANTHER TRANSCRIPTION FACTOR KUA1 3 215 - -
Alju01g3787 251 SMART sant 92 142 IPR001005 -
Alju01g3787 251 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Alju01g3787 251 FunFam transcription factor MYB1R1 94 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3787 Alju-ChrAlju01 67755575 67756536 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju01g3787 Myb_DNA-binding 3.8e-11 CL0123